RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 PDLIM7Q9NR12 457 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 UBQLN4Q9NRR5 601 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 GAB2Q9UQC2 676 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 MRPS28Q9Y2Q9 187 aaKnown RBP6.43□□□□□ -1.38
SORT1-209ENST00000538502 TMEM235A6NFC5 223 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 ZNF860A6NHJ4 632 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 RTCAO00442 366 aaKnown RBP6.43□□□□□ -1.38
SORT1-209ENST00000538502 SERPINA2P20848 420 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 FGF7P21781 194 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 PRLHRP49683 370 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 LY6G5CQ5SRR4 150 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 RNLSQ5VYX0 342 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 OGFOD3Q6PK18 319 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 ACOT4Q8N9L9 421 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 ZNF384Q8TF68 577 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 HPSE2Q8WWQ2 592 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 NEIL2Q969S2 332 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 FAM3DQ96BQ1 224 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 BOCQ9BWV1 1114 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 TMPRSS5Q9H3S3 457 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 TUBB1Q9H4B7 451 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 RYDENQ9NUL5 291 aaKnown RBP6.43□□□□□ -1.38
SORT1-209ENST00000538502 CBLCQ9ULV8 474 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 KCPQ6ZWJ8 1503 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 LAMB4A4D0S4 1761 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 CTXN2P0C2S0 81 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 FBXO45P0C2W1 286 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 H2AFB1P0C5Y9 115 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 FABP6P51161 128 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 ANKRD16Q6P6B7 361 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 LANCL3Q6ZV70 420 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 GTF2H5Q6ZYL4 71 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 ZNF765Q7L2R6 523 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 RTL10Q7L3V2 364 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 MAVSQ7Z434 540 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 MFSD9Q8NBP5 474 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 OR9K2Q8NGE7 335 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 PSMF1Q92530 271 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 TSLPQ969D9 159 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 OR5M11Q96RB7 305 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 ZNF331Q9NQX6 463 aaPredicted RBP6.43□□□□□ -1.38
SORT1-209ENST00000538502 TRAV27A0A087WT01 109 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 A0A087WUU8 490 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 J3KTA2 159 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 SCAMP1O15126 338 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 SIX6O95475 246 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 DDAH2O95865 285 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 GPX2P18283 190 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 FAM189BP81408 668 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 ENDOGQ14249 297 aaKnown RBP6.43□□□□□ -1.38
SORT1-209ENST00000538502 IAH1Q2TAA2 248 aaPredicted RBP6.43□□□□□ -1.38
SORT1-209ENST00000538502 KCTD11Q693B1 232 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 OR2G3Q8NGZ4 309 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 HMGB4Q8WW32 186 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 IL17FQ96PD4 163 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 ALG12Q9BV10 488 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 KCNG2Q9UJ96 466 aa6.43□□□□□ -1.38
SORT1-209ENST00000538502 ZNF142P52746 1687 aaPredicted RBP6.42□□□□□ -1.38
SORT1-209ENST00000538502 K7EQM0 130 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 C1orf105O95561 183 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 NAT1P18440 290 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 EPHA5P54756 1037 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 RAG2P55895 527 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 RACK1P63244 317 aaKnown RBP6.42□□□□□ -1.38
SORT1-209ENST00000538502 SLC10A1Q14973 349 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 SLC22A6Q4U2R8 563 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 ZNF684Q5T5D7 378 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 FOXB2Q5VYV0 432 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 SAXO2Q658L1 398 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 Q6ZTK2 550 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 CATSPERDQ86XM0 798 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 SIGLECL1Q8N7X8 197 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 MDGA1Q8NFP4 955 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 CORO2AQ92828 525 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 SLC22A12Q96S37 553 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 PBX4Q9BYU1 374 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 USP36Q9P275 1121 aaKnown RBP6.42□□□□□ -1.38
SORT1-209ENST00000538502 WNT6Q9Y6F9 365 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 MEIS3P2A8K0S8 358 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 GLCEO94923 617 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 GABRB1P18505 474 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 GALP22466 123 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 TNFSF4P23510 183 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 NOVP48745 357 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 SIM1P81133 766 aaPredicted RBP6.42□□□□□ -1.38
SORT1-209ENST00000538502 ECH1Q13011 328 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 NFATC4Q14934 902 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 C6orf132Q5T0Z8 1188 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 AGBL4Q5VU57 503 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 HMGN2P46Q86SG4 172 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 VRK2Q86Y07 508 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 CPXM2Q8N436 756 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 OR51A2Q8NGJ7 313 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 TVP23CQ96ET8 276 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 TIMM29Q9BSF4 260 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 HINT2Q9BX68 163 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 ARV1Q9H2C2 271 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 DUSP21Q9H596 190 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 SLC35D1Q9NTN3 355 aa6.42□□□□□ -1.38
SORT1-209ENST00000538502 MCRIP1C9JLW8 97 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms