RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 OR52P1PQ8NH57 321 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 RDH5Q92781 318 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 CCDC115Q96NT0 180 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 PANX1Q96RD7 426 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 RBM4Q9BWF3 364 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 RACGAP1Q9H0H5 632 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 ZNF275Q9NSD4 429 aaPredicted RBP12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 MYEF2Q9P2K5 600 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 FZR1Q9UM11 496 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 RCE1Q9Y256 329 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 NOX1Q9Y5S8 564 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 ZNF99A8MXY4 864 aaPredicted RBP12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 FTCDNL1E5RQL4 147 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 M0R3G1 203 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 ITM2AO43736 263 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 NPIPB7O75200 414 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 ERLIN1O75477 346 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 PNPP00491 289 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 BPGMP07738 259 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 NUDT17P0C025 328 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 CLNS1AP54105 237 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 POU3F1Q03052 451 aaPredicted RBP12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 PIGFQ07326 219 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 C1DQ13901 141 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 CHI3L2Q15782 390 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 GSG1Q2KHT4 349 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 DPY19L1Q2PZI1 675 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 SLC9B1Q4ZJI4 515 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 AWAT1Q58HT5 328 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 ZNF311Q5JNZ3 666 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 CARD17Q5XLA6 110 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 C1orf229Q6ZS94 237 aaPredicted RBP12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 ZNF621Q6ZSS3 439 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 LRP11Q86VZ4 500 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 LRRC34Q8IZ02 419 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 ZNF781Q8N8C0 355 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 EIF1ADQ8N9N8 165 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 ANKK1Q8NFD2 765 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 IL17RDQ8NFM7 739 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 MFSD8Q8NHS3 518 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 YIPF5Q969M3 257 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 KTI12Q96EK9 354 aaPredicted RBP12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 PKNOX2Q96KN3 472 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 ZIM3Q96PE6 472 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 PTDSS2Q9BVG9 487 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 MS4A5Q9H3V2 200 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 B3GAT1Q9P2W7 334 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 BTNL2Q9UIR0 455 aa12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 ZNF443Q9Y2A4 671 aaPredicted RBP12.03□□□□□ -0.48
SMARCA4-206ENST00000538456 TRRAPQ9Y4A5 3859 aa12.02□□□□□ -0.48
SMARCA4-206ENST00000538456 A0A096LPI6 279 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 TRAV20A0A0B4J274 112 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 NCR1O76036 304 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 AVPP01185 164 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 BCHEP06276 602 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 NAT2P11245 290 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 EVX1P49640 407 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 LMO4P61968 165 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 HOXC5Q00444 222 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 MAPK11Q15759 364 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 TRMT5Q32P41 509 aaKnown RBP12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 RPS26P11Q5JNZ5 115 aaPredicted RBP12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 PHYHD1Q5SRE7 291 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 GKAP1Q5VSY0 366 aaPredicted RBP12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 USP43Q70EL4 1123 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 SERPINA11Q86U17 422 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 CLIP4Q8N3C7 705 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 PIK3C3Q8NEB9 887 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 STK35Q8TDR2 534 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.02□□□□□ -0.497e-6■■■□□ 16
SMARCA4-206ENST00000538456 TEX37Q96LM6 180 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 OXGR1Q96P68 337 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 OR2M2Q96R28 347 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 JMJD8Q96S16 334 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 SLC6A7Q99884 636 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 P2RX2Q9UBL9 471 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 DSPPQ9NZW4 1301 aa12.02□□□□□ -0.49
SMARCA4-206ENST00000538456 A0A1W2PPW3 197 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 WDR91A4D1P6 747 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 M0R082 166 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 ADRA2CP18825 462 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 PTDSS1P48651 473 aaKnown RBP12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 ARFIP2P53365 341 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 UFM1P61960 85 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 TXNL4AP83876 142 aaKnown RBP12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 GALK2Q01415 458 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 EGR4Q05215 589 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 LARS2Q15031 903 aaKnown RBP12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 ALKBH6Q3KRA9 238 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 RNF220Q5VTB9 566 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 REP15Q6BDI9 236 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 NUDCD3Q8IVD9 361 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 CCDC36Q8IYA8 594 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 TMEM123Q8N131 208 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 RIBC1Q8N443 379 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 ZNF417Q8TAU3 575 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 OR52E6Q96RD3 313 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 ZNF587Q96SQ5 575 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 NUF2Q9BZD4 464 aa12.01□□□□□ -0.49
SMARCA4-206ENST00000538456 B3GNT2Q9NY97 397 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms