RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CNTRLQ7Z7A1 2325 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PKD1L2Q7Z442 2459 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 IGHV3-15A0A0B4J1V0 119 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 A0A1B0GTH9 108 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 A6NIZ1 184 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ARHGEF9O43307 516 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 DNPH1O43598 174 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 FAM20BO75063 409 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SMNDC1O75940 238 aaKnown RBP eCLIP9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 VAMP5O95183 116 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RPSAP08865 295 aaKnown RBP9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ABOP16442 354 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 MYF6P23409 242 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PCYT1AP49585 367 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 DAP3P51398 398 aaKnown RBP9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RAP1BP61224 184 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RAP1AP62834 184 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CDK5Q00535 292 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 POU3F1Q03052 451 aaPredicted RBP9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 LGALS3BPQ08380 585 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CMPK2Q5EBM0 449 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RNFT1Q5M7Z0 435 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 EEF1A1P5Q5VTE0 462 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ZNF691Q5VV52 312 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ACSM5Q6NUN0 579 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ZNF585AQ6P3V2 769 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PAQR6Q6TCH4 344 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SLC35D2Q76EJ3 337 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 LSRQ86X29 649 aaPredicted RBP9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 OR8J1Q8NGP2 316 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 OR4K13Q8NH42 304 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TRUB1Q8WWH5 349 aaKnown RBP9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ROBO4Q8WZ75 1007 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ANKRD60Q9BZ19 345 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ZDHHC11Q9H8X9 412 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PNPLA3Q9NST1 481 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 KLHL13Q9P2N7 655 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TNFRSF10DQ9UBN6 386 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ZNF346Q9UL40 294 aaKnown RBP9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 BLOC1S6Q9UL45 172 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 NDRG4Q9ULP0 352 aaKnown RBP9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 LIPGQ9Y5X9 500 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 NCKAP5O14513 1909 aa9.56□□□□□ -0.88
TNFRSF1A-211ENST00000538363 MPDZO75970 2070 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TEX13CA0A0J9YWL9 993 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 AQP7P3A6NL99 342 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 DLGAP1O14490 977 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 AQP7O14520 342 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 IMPA2O14732 288 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 KRT33AO76009 404 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TPOP07202 933 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 GNAO1P09471 354 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ZNF708P17019 499 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 EPHA2P29317 976 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PTGS2P35354 604 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 GUCA1AP43080 201 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 LHX2P50458 406 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SUCLG1P53597 346 aaKnown RBP9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CLRN1P58418 232 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RPL27P61353 136 aaKnown RBP9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CSNK2BP67870 215 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 HSF1Q00613 529 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RASGEF1BQ0VAM2 473 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ZP4Q12836 540 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 C3AR1Q16581 482 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 KLHL12Q53G59 568 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 MEDAGQ5VYS4 303 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 C12orf73Q69YU5 71 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 VASNQ6EMK4 673 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 LEG1Q6P5S2 330 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 GFRALQ6UXV0 394 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 FCRLAQ7L513 359 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PXKQ7Z7A4 578 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CCDC103Q8IW40 242 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 LNX2Q8N448 690 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 LSM14AQ8ND56 463 aaKnown RBP9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 BPIFB6Q8NFQ5 453 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 OR8D4Q8NGM9 314 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 OR5M9Q8NGP3 310 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 OR4Q3Q8NH05 313 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RFKQ969G6 155 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RBP7Q96R05 134 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TAAR6Q96RI8 345 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TRIB1Q96RU8 372 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PITX2Q99697 317 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TIMP4Q99727 224 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 OR51V1Q9H2C8 321 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TAS2R5Q9NYW4 299 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 EMC3Q9P0I2 261 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SEC14L4Q9UDX3 406 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RNF6Q9Y252 685 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 MYRFQ9Y2G1 1151 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TPRKBQ9Y3C4 175 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ZFHX4Q86UP3 3567 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CACNA1GO43497 2377 aa9.55□□□□□ -0.88
TNFRSF1A-211ENST00000538363 FTCDNL1E5RQL4 147 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 H0YC42 278 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 MS4A18H0YCH9 400 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ERVH48-1M5A8F1 160 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms