RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 OR5J2Q8NH18 312 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 LIPHQ8WWY8 451 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 TMEM45BQ96B21 275 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 ZHX1-C8orf76Q96EF9 292 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 ZNF837Q96EG3 531 aaPredicted RBP11.56□□□□□ -0.56
CHFR-216ENST00000538235 SGTBQ96EQ0 304 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 EPYCQ99645 322 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 NAA11Q9BSU3 229 aaPredicted RBP11.56□□□□□ -0.56
CHFR-216ENST00000538235 EMC6Q9BV81 110 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 PIGMQ9H3S5 423 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 MAGIXQ9H6Y5 334 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 MCCC2Q9HCC0 563 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 FANCFQ9NPI8 374 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 GLRX2Q9NS18 164 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 SLC7A10Q9NS82 523 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 SELENONQ9NZV5 590 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 ZNF229Q9UJW7 825 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 MED31Q9Y3C7 131 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 CACNA1DQ01668 2161 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 OR2T1O43869 369 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 GMNNO75496 209 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 UPK3AO75631 287 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 SERPINI2O75830 405 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 ATP5HO75947 161 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 MT-ATP6P00846 226 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 IGF2P01344 180 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 THBDP07204 575 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 COX5AP20674 150 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 CLDN17P56750 224 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 POU3F1Q03052 451 aaPredicted RBP11.55□□□□□ -0.56
CHFR-216ENST00000538235 PUDPQ08623 228 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 PMS2P3Q13401 168 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 SP5Q6BEB4 398 aaPredicted RBP11.55□□□□□ -0.56
CHFR-216ENST00000538235 CASP12Q6UXS9 341 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 THSD4Q6ZMP0 1018 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 CCDC121Q6ZUS5 278 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 ZER1Q7Z7L7 766 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 GALNT5Q7Z7M9 940 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 SPATA24Q86W54 205 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 CXorf67Q86X51 503 aaPredicted RBP11.55□□□□□ -0.56
CHFR-216ENST00000538235 DMRTC2Q8IXT2 367 aaPredicted RBP11.55□□□□□ -0.56
CHFR-216ENST00000538235 HS3ST5Q8IZT8 346 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 PAPD5Q8NDF8 572 aaKnown RBP11.55□□□□□ -0.56
CHFR-216ENST00000538235 LINC01560Q8TB33 94 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 MCUR1Q96AQ8 359 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 BPIFA2Q96DR5 249 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 OXGR1Q96P68 337 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 ALKBH3Q96Q83 286 aaPredicted RBP11.55□□□□□ -0.56
CHFR-216ENST00000538235 MYCBPQ99417 103 aaPredicted RBP11.55□□□□□ -0.56
CHFR-216ENST00000538235 SF3B5Q9BWJ5 86 aaKnown RBP11.55□□□□□ -0.56
CHFR-216ENST00000538235 NELFAQ9H3P2 528 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 ANKRD19PQ9H560 264 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 RASD1Q9Y272 281 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 B3GALT5Q9Y2C3 310 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 NOSIPQ9Y314 301 aaKnown RBP11.55□□□□□ -0.56
CHFR-216ENST00000538235 APCP25054 2843 aa11.55□□□□□ -0.56
CHFR-216ENST00000538235 ITPR2Q14571 2701 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 ABCA12Q86UK0 2595 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 A0A1W2PPR1 153 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 IMPA2O14732 288 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 FKBP6O75344 327 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 GADD45GO95257 159 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 TP53P04637 393 aaPredicted RBP11.54□□□□□ -0.56
CHFR-216ENST00000538235 F13BP05160 661 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 ADORA3P0DMS8 318 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 CD79BP40259 229 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 C9orf135Q5VTT2 229 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 HMBOX1Q6NT76 420 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 PGBD2Q6P3X8 592 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 ZNF730Q6ZMV8 503 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 MEX3BQ6ZN04 569 aaKnown RBP11.54□□□□□ -0.56
CHFR-216ENST00000538235 NANOGNBQ7Z5D8 188 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 CLDN22Q8N7P3 220 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 HS6ST2Q96MM7 605 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 OR2M2Q96R28 347 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 CHID1Q9BWS9 393 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 ASPNQ9BXN1 380 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 NTN4Q9HB63 628 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 NANSQ9NR45 359 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 CRIM1Q9NZV1 1036 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 MALT1Q9UDY8 824 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 FOXD3Q9UJU5 478 aaPredicted RBP11.54□□□□□ -0.56
CHFR-216ENST00000538235 AURKCQ9UQB9 309 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 HIF3AQ9Y2N7 669 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 CORINQ9Y5Q5 1042 aa11.54□□□□□ -0.56
CHFR-216ENST00000538235 MAGED1Q9Y5V3 778 aaPredicted RBP11.54□□□□□ -0.56
CHFR-216ENST00000538235 CSMD2Q7Z408 3487 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 IGKV1D-43A0A0B4J1Z2 117 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 LOC102725191A0A1B0GVB3 256 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 MCIDASD6RGH6 385 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 ANKRD65E5RJM6 399 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 TIPRLO75663 272 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 LYZL6O75951 148 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 ADAP00813 363 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 IGFBP1P08833 259 aaPredicted RBP11.53□□□□□ -0.56
CHFR-216ENST00000538235 RAP2AP10114 183 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 UMPSP11172 480 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 IFNGR1P15260 489 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 NQO1P15559 274 aaKnown RBP11.53□□□□□ -0.56
CHFR-216ENST00000538235 LOXP28300 417 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms