RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MED29Q9NX70 200 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 MRPL39Q9NYK5 338 aaKnown RBP11.55□□□□□ -0.56
PRKDC-206ENST00000536429 AP3M1Q9Y2T2 418 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 ARL2BPQ9Y2Y0 163 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 CORINQ9Y5Q5 1042 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 SNX13Q9Y5W8 968 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 ZFHX3Q15911 3703 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 MTORP42345 2549 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 LOC102725191A0A1B0GVB3 256 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 J3KTA2 159 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 SERPINI2O75830 405 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 OR5F1O95221 314 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 IFNA14P01570 189 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 YAP1P46937 504 aaKnown RBP11.54□□□□□ -0.56
PRKDC-206ENST00000536429 TAS2R41P59536 307 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 SELENOWP63302 87 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 POU3F1Q03052 451 aaPredicted RBP11.54□□□□□ -0.56
PRKDC-206ENST00000536429 MFSD13AQ14CX5 517 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 CARD17Q5XLA6 110 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 TTC33Q6PID6 262 aaPredicted RBP11.54□□□□□ -0.56
PRKDC-206ENST00000536429 P2RY8Q86VZ1 359 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 KRTAP1-3Q8IUG1 177 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 UEVLDQ8IX04 471 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 TMEM123Q8N131 208 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 RNF148Q8N7C7 305 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 SCAIQ8N9R8 606 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 IGFBPL1Q8WX77 278 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 MUCL1Q96DR8 90 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 MPP4Q96JB8 637 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 ALPK1Q96QP1 1244 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 OR2M2Q96R28 347 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 KCTD14Q9BQ13 255 aaPredicted RBP11.54□□□□□ -0.56
PRKDC-206ENST00000536429 SLC17A5Q9NRA2 495 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 C20orf141Q9NUB4 165 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 EGFL7Q9UHF1 273 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 RIMS3Q9UJD0 308 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 A4GNTQ9UNA3 340 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 RCE1Q9Y256 329 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 RNF115Q9Y4L5 304 aa11.54□□□□□ -0.56
PRKDC-206ENST00000536429 ACANP16112 2415 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 SHISA9B4DS77 424 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 ZNF587BE7ETH6 402 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 C11orf98E9PRG8 122 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 HS3ST1O14792 307 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 FFAR1O14842 300 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 GSTA4O15217 222 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 PIP5K1CO60331 668 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 KRT33AO76009 404 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 ZNF682O95780 498 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 SERPINA1P01009 418 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 CD3EP07766 207 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 AHCYP23526 432 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 ROR2Q01974 943 aaKnown RBP11.53□□□□□ -0.56
PRKDC-206ENST00000536429 PUDPQ08623 228 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 OR7E24Q6IFN5 339 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 CBLL1Q75N03 491 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 TSEN54Q7Z6J9 526 aaKnown RBP11.53□□□□□ -0.56
PRKDC-206ENST00000536429 FAM156AQ8NDB6 213 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 C1orf162Q8NEQ5 155 aaPredicted RBP11.53□□□□□ -0.56
PRKDC-206ENST00000536429 OR5J2Q8NH18 312 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 HSH2DQ96JZ2 352 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 CCT8L2Q96SF2 557 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 CCL19Q99731 98 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 LINC00470Q9BZP3 86 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 NELFAQ9H3P2 528 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 ESRP2Q9H6T0 727 aaKnown RBP11.53□□□□□ -0.56
PRKDC-206ENST00000536429 NGBQ9NPG2 151 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 TAS2R5Q9NYW4 299 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 ADA2Q9NZK5 511 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 RHCGQ9UBD6 479 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 USF3Q68DE3 2245 aa11.53□□□□□ -0.56
PRKDC-206ENST00000536429 A0A096LPE4 126 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 A0A1W2PPZ6 126 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 SLC35F4A4IF30 521 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 M0R1B8 84 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 ABCD4O14678 606 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 SLC43A1O75387 559 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 MT-ATP6P00846 226 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 ASAH2BP0C7U1 165 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 ADORA3P0DMS8 318 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 FUT1P19526 365 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 TUBA1BP68363 451 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 TUBA4AP68366 448 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 TBRG1Q3YBR2 411 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 ZNF672Q499Z4 452 aaPredicted RBP11.52□□□□□ -0.57
PRKDC-206ENST00000536429 C20orf204Q6ZNR8 217 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 TUBA1AQ71U36 451 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 MEX3DQ86XN8 651 aaKnown RBP11.52□□□□□ -0.57
PRKDC-206ENST00000536429 C20orf196Q8IYI0 205 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 WFDC11Q8NEX6 87 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 OR1K1Q8NGR3 316 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 TMEM239Q8WW34 195 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 BCL2L2Q92843 193 aaPredicted RBP11.52□□□□□ -0.57
PRKDC-206ENST00000536429 FAM162AQ96A26 154 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 PRRC1Q96M27 445 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 LRRC37BQ96QE4 947 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 SLC19A3Q9BZV2 496 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 FKRPQ9H9S5 495 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 GPR35Q9HC97 309 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 SPAG4Q9NPE6 437 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms