RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 MGMTP16455 207 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CD33P20138 364 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 GDI1P31150 447 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 MAT2AP31153 395 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 DLSTP36957 453 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 KIR3DL2P43630 455 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 MAPK9P45984 424 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CSNK1DP48730 415 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 PTH2RP49190 550 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 DHPSP49366 369 aaPredicted RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 AFF3P51826 1226 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 TDGF1P3P51864 188 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 WNT3P56703 355 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 WDR5P61964 334 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 SELENOWP63302 87 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 SHC2P98077 582 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 AIMP2Q13155 320 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 BIKQ13323 160 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 FZD5Q13467 585 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 TPBGQ13641 420 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 ZNF234Q14588 700 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 KCNAB1Q14722 419 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 SLC25A52Q3SY17 297 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 XKR3Q5GH77 459 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 SIRPB2Q5JXA9 342 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 TPGS2Q68CL5 300 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 PSAPL1Q6NUJ1 521 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 VITQ6UXI7 678 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CLEC20AQ6ZU45 233 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 PGAP1Q75T13 922 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 TPRA1Q86W33 373 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 UBALD2Q8IYN6 164 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 C17orf78Q8N4C9 275 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CLDN19Q8N6F1 224 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HORMAD2Q8N7B1 307 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 LRRC52Q8N7C0 313 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 C19orf47Q8N9M1 422 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 LMNTD1Q8N9Z9 388 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 OR52E4Q8NGH9 312 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 OR51G2Q8NGK0 314 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 OR1L6Q8NGR2 347 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 OR1N1Q8NGS0 311 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 OR9A1PQ8NGU1 263 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 OR6K2Q8NGY2 324 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 OR14K1Q8NGZ2 314 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HPSE2Q8WWQ2 592 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 SMPDL3BQ92485 455 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 EDAQ92838 391 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 RGMAQ96B86 450 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 NTNG2Q96CW9 530 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 ANAPC16Q96DE5 110 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 DTD2Q96FN9 168 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 ADAM2Q99965 735 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 MESP1Q9BRJ9 268 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 AARSD1Q9BTE6 412 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 SEC11CQ9BY50 192 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 EGLN1Q9GZT9 426 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CACYBPQ9HB71 228 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 GOLGA2P5Q9HBQ8 144 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 PARPBPQ9NWS1 579 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 FAM120CQ9NX05 1096 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 PRR13Q9NZ81 148 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 TESQ9UGI8 421 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 FBXL4Q9UKA2 621 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 SELENOKQ9Y6D0 94 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 A0A1B0GUH1 482 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HMSDA8MTL9 139 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 PRAMEF26H0Y7S4 382 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 SMAD7O15105 426 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 PGRMC2O15173 223 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 GRM6O15303 877 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 LDB2O43679 373 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HIST1H2BKO60814 126 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 REM1O75628 298 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 SCGNO76038 276 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 SCAF4O95104 1147 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 TRGC2P03986 189 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 RPN2P04844 631 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CRHP06850 196 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HIST1H2BJP06899 126 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 EPHX1P07099 455 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 GSTP1P09211 210 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 GKN3PP0CG01 181 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 GAAP10253 952 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 COX7A2P14406 83 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 C5AR1P21730 350 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 XPAP23025 273 aaPredicted RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 HIST1H2BOP23527 126 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 PAX6P26367 422 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CERS1P27544 350 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 FGF9P31371 208 aaPredicted RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 HIST1H2BBP33778 126 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 TAGLN2P37802 199 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 MECP2P51608 486 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 HIST1H2BDP58876 126 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HIST1H2BCP62807 126 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 RPS27AP62979 156 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 UBA52P62987 128 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 FOXO1Q12778 655 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HIST2H2BEQ16778 126 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms