RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PARGQ86W56 976 aa14.61□□□□□ -0.07
CHMP1A-202ENST00000535997 TIGD4Q8IY51 512 aa14.61□□□□□ -0.07
CHMP1A-202ENST00000535997 C10orf53Q8N6V4 93 aa14.61□□□□□ -0.07
CHMP1A-202ENST00000535997 OR8H1Q8NGG4 311 aa14.61□□□□□ -0.07
CHMP1A-202ENST00000535997 RGP1Q92546 391 aaPredicted RBP14.61□□□□□ -0.07
CHMP1A-202ENST00000535997 ORAI1Q96D31 301 aa14.61□□□□□ -0.07
CHMP1A-202ENST00000535997 KLHDC7BQ96G42 594 aa14.61□□□□□ -0.07
CHMP1A-202ENST00000535997 MAP6Q96JE9 813 aa14.61□□□□□ -0.07
CHMP1A-202ENST00000535997 ADAD1Q96M93 576 aaKnown RBP14.61□□□□□ -0.07
CHMP1A-202ENST00000535997 SLITRK2Q9H156 845 aa14.61□□□□□ -0.07
CHMP1A-202ENST00000535997 KLHL9Q9P2J3 617 aa14.61□□□□□ -0.07
CHMP1A-202ENST00000535997 GON4LQ3T8J9 2241 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 EML5Q05BV3 1969 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 PRR32B1ATL7 298 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 TNFRSF10AO00220 468 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 UPK3AO75631 287 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 SERPINI2O75830 405 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 UBL4AP11441 157 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 POU3F3P20264 500 aaPredicted RBP14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 PSMB1P20618 241 aaKnown RBP14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 MRPS10P82664 201 aaKnown RBP14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 SKP2Q13309 424 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 CCINQ13939 588 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 CD226Q15762 336 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 LIPNQ5VXI9 398 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 TEX261Q6UWH6 196 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 OR11H4Q8NGC9 324 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 PHOSPHO1Q8TCT1 267 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 C15orf40Q8WUR7 153 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 FCAMRQ8WWV6 532 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 SLC25A38Q96DW6 304 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 MOGAT1Q96PD6 335 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 CITED4Q96RK1 184 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 SLC25A18Q9H1K4 315 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 C20orf85Q9H1P6 137 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 TCF7L1Q9HCS4 588 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 HRASLSQ9HDD0 168 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 ELF5Q9UKW6 265 aaPredicted RBP14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 PLCL2Q9UPR0 1127 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 U3KQ87 197 aa14.6□□□□□ -0.07
CHMP1A-202ENST00000535997 TMEM72A0PK05 275 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 H0YIG0 161 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 ZNF593O00488 134 aaPredicted RBP14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 SCDO00767 359 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 KHNYNO15037 678 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 ZNF264O43296 627 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 SSNA1O43805 119 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 PRAF2O60831 178 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 NOS1APO75052 506 aaPredicted RBP14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 IL33O95760 270 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 GRPRP30550 384 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 PPICP45877 212 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 CAPZBP47756 277 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 FASLGP48023 281 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 EGR4Q05215 589 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 ALKBH1Q13686 389 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 PWWP2BQ6NUJ5 590 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 STAC2Q6ZMT1 411 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 GATSQ8NAP1 163 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 BEST4Q8NFU0 473 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 OR52I2Q8NH67 350 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 OR5AK2Q8NH90 309 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 TSSK2Q96PF2 358 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 LRRC61Q9BV99 259 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 FRRS1LQ9P0K9 344 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 GRHPRQ9UBQ7 328 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 MRM2Q9UI43 246 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 C17orf105B2RV13 164 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 TSC22D2O75157 780 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 KRT33AO76009 404 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 TPPPO94811 219 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 TGM6O95932 706 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 TPOP07202 933 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 UQCRC1P31930 480 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 NUDT1P36639 197 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 GABRA4P48169 554 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 ELFN2Q5R3F8 820 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 SFRP4Q6FHJ7 346 aaPredicted RBP14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 CBLN3Q6UW01 205 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 OR11G2Q8NGC1 345 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 ANGPTL6Q8NI99 470 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 RADILQ96JH8 1075 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 LMF1Q96S06 567 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 MNTQ99583 582 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 LPAR4Q99677 370 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 SRA1Q9HD15 236 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 SCP2D1Q9UJQ7 156 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 CYP8B1Q9UNU6 501 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 RCE1Q9Y256 329 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 NPTNQ9Y639 398 aa14.59□□□□□ -0.07
CHMP1A-202ENST00000535997 TP53BP1Q12888 1972 aaPredicted RBP14.58□□□□□ -0.07
CHMP1A-202ENST00000535997 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 A0A1W2PPC4 97 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 GMDSO60547 372 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 RPP14O95059 124 aaKnown RBP14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 PROS1P07225 676 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 OR8G3PP0DMU2 310 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 MAGEB1P43366 347 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms