RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ZNF43P17038 809 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 GPR4P46093 362 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 OR3A2P47893 321 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 LIMS1P48059 325 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 HMGA2P52926 109 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 IL1RL1Q01638 556 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 PUDPQ08623 228 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 C1DQ13901 141 aaKnown RBP10.69□□□□□ -0.7
CHD4-203ENST00000535717 EXOC3L2Q2M3D2 409 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 OR2T5Q6IEZ7 315 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 TFAP2EQ6VUC0 442 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 NHLRC1Q6VVB1 395 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 HIST3H2AQ7L7L0 130 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 RRM2BQ7LG56 351 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 NANOGNBQ7Z5D8 188 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 PAPD5Q8NDF8 572 aaKnown RBP10.69□□□□□ -0.7
CHD4-203ENST00000535717 OR4K5Q8NGD3 323 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 OR2T29Q8NH02 315 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 HIST1H2ACQ93077 130 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 RNASE6Q93091 150 aaKnown RBP10.69□□□□□ -0.7
CHD4-203ENST00000535717 TMEM45BQ96B21 275 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 ALPK1Q96QP1 1244 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 RBM24Q9BX46 236 aaKnown RBP10.69□□□□□ -0.7
CHD4-203ENST00000535717 CCM2LQ9NUG4 571 aaPredicted RBP10.69□□□□□ -0.7
CHD4-203ENST00000535717 GALNT8Q9NY28 637 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 VNN3Q9NY84 501 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 PLEKHB1Q9UF11 243 aaPredicted RBP10.69□□□□□ -0.7
CHD4-203ENST00000535717 LYVE1Q9Y5Y7 322 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 CELSR2Q9HCU4 2923 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 EFCAB9A8MZ26 197 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 BLOC1S5-TXNDC5H3BN57 136 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 TNFRSF11BO00300 401 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 TRAF3IP2O43734 574 aaPredicted RBP10.68□□□□□ -0.7
CHD4-203ENST00000535717 FKBP6O75344 327 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 MRPL33O75394 65 aaKnown RBP10.68□□□□□ -0.7
CHD4-203ENST00000535717 OR6A2O95222 327 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 TSPAN19P0C672 248 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 SAGP10523 405 aaPredicted RBP10.68□□□□□ -0.7
CHD4-203ENST00000535717 HOXB6P17509 224 aaKnown RBP10.68□□□□□ -0.7
CHD4-203ENST00000535717 AHCYP23526 432 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 UQCRC1P31930 480 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 OMPP47874 163 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 ZP4Q12836 540 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 PPP1R8Q12972 351 aaKnown RBP10.68□□□□□ -0.7
CHD4-203ENST00000535717 FHL1Q13642 323 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 CASP12Q6UXS9 341 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 TMPRSS11FQ6ZWK6 438 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 AAED1Q7RTV5 226 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 PXKQ7Z7A4 578 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 STK32CQ86UX6 486 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 UEVLDQ8IX04 471 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 ZNF100Q8IYN0 542 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 CDK20Q8IZL9 346 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 OR4C15Q8NGM1 316 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 MOSPD2Q8NHP6 518 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 APH1AQ96BI3 265 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 FAM46AQ96IP4 442 aaKnown RBP10.68□□□□□ -0.7
CHD4-203ENST00000535717 FANCFQ9NPI8 374 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 PARPBPQ9NWS1 579 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 PRSS50Q9UI38 385 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 TMCC3Q9ULS5 477 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 TMEM5Q9Y2B1 443 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 NOX1Q9Y5S8 564 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 DCHS2Q6V1P9 2916 aa10.68□□□□□ -0.7
CHD4-203ENST00000535717 ANKHD1Q8IWZ3 2542 aaKnown RBP10.67□□□□□ -0.7
CHD4-203ENST00000535717 C11orf98E9PRG8 122 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 CDC42EP2O14613 210 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 RNF13O43567 381 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 CST1P01037 141 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 IGHV3-9P01782 118 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 IGFBP2P18065 325 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 COL8A1P27658 744 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 CD79BP40259 229 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 AQP2P41181 271 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 SELENOPP49908 381 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 CLDN17P56750 224 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 RPS4XP62701 263 aaKnown RBP10.67□□□□□ -0.7
CHD4-203ENST00000535717 POU3F1Q03052 451 aaPredicted RBP10.67□□□□□ -0.7
CHD4-203ENST00000535717 RPL18Q07020 188 aaKnown RBP10.67□□□□□ -0.7
CHD4-203ENST00000535717 FAM27E3Q08E93 113 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 LAPTM4AQ15012 233 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 BEND4Q6ZU67 534 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 ZER1Q7Z7L7 766 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 OAFQ86UD1 273 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 WDFY1Q8IWB7 410 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 GABRG1Q8N1C3 465 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 ACBD4Q8NC06 268 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 OR13C2Q8NGS9 318 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 OR51A7Q8NH64 312 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 LRRC46Q96FV0 321 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 TXNDC15Q96J42 360 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 TNFRSF13CQ96RJ3 184 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 GPA33Q99795 319 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 REEP1Q9H902 201 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 ELOVL5Q9NYP7 299 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 FOXD3Q9UJU5 478 aaPredicted RBP10.67□□□□□ -0.7
CHD4-203ENST00000535717 HIF3AQ9Y2N7 669 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 SAMHD1Q9Y3Z3 626 aaKnown RBP10.67□□□□□ -0.7
CHD4-203ENST00000535717 U3KQV3 271 aa10.67□□□□□ -0.7
CHD4-203ENST00000535717 ALPK2Q86TB3 2170 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms