RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 HOXA9P31269 272 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 KCNIP4Q6PIL6 250 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 MFSD9Q8NBP5 474 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 ZNF576Q9H609 170 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 MARCH5Q9NX47 278 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 OR6C76A6NM76 312 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 DHRS4L1P0CG22 281 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 EMX1Q04741 257 aaPredicted RBP11.71□□□□□ -0.54
SPG11-203ENST00000535302 ZNF687Q8N1G0 1237 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 DUSP23Q9BVJ7 150 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 ANKRD60Q9BZ19 345 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 CCDC88AQ3V6T2 1871 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 ZFAND5O76080 213 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 PEA15Q15121 130 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 ACKR1Q16570 336 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 PARM1Q6UWI2 310 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 NLRC3Q7RTR2 1065 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 HRASLS5Q96KN8 279 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 SPIN2AQ99865 258 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 SPIN2BQ9BPZ2 258 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 FOXQ1Q9C009 403 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 NAA50Q9GZZ1 169 aaKnown RBP11.71□□□□□ -0.54
SPG11-203ENST00000535302 CSNK1G1Q9HCP0 422 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 UFSP2Q9NUQ7 469 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 IL37Q9NZH6 218 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 OSGIN1Q9UJX0 560 aa11.71□□□□□ -0.54
SPG11-203ENST00000535302 SRPX2O60687 465 aaPredicted RBP11.7□□□□□ -0.54
SPG11-203ENST00000535302 UPK1BO75841 260 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 NDUFB7P17568 137 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 KCNJ10P78508 379 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 TGFBR3Q03167 851 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 KEAP1Q14145 624 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 SPCS2Q15005 226 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 GPR19Q15760 415 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 PGGHGQ32M88 737 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 MISPQ8IVT2 679 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 GAB3Q8WWW8 586 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 NXPE3Q969Y0 559 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 PINX1Q96BK5 328 aaKnown RBP11.7□□□□□ -0.54
SPG11-203ENST00000535302 UHRF2Q96PU4 802 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 C5P01031 1676 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 NXPH2O95156 264 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 TM4SF4P48230 202 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 DCAF12Q5T6F0 453 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 SSX7Q7RTT5 188 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 UTP4Q969X6 686 aaKnown RBP11.7□□□□□ -0.54
SPG11-203ENST00000535302 TNFRSF13CQ96RJ3 184 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 MCOLN1Q9GZU1 580 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 AGPAT4Q9NRZ5 378 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 QPCTLQ9NXS2 382 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 NXT1Q9UKK6 140 aaKnown RBP11.7□□□□□ -0.54
SPG11-203ENST00000535302 EMC9Q9Y3B6 208 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 NUBP2Q9Y5Y2 271 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 USP3Q9Y6I4 520 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 LOC102724200A0A096LPH7 203 aaPredicted RBP11.7□□□□□ -0.54
SPG11-203ENST00000535302 P2RY10O00398 339 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 GPR75O95800 540 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 IGHG1P01857 330 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 FOLR1P15328 257 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 CTRB1P17538 263 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 IMPA1P29218 277 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 KCNJ8Q15842 424 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 ADPRMQ3LIE5 342 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 CTRB2Q6GPI1 263 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 MARCH3Q86UD3 253 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 MMP21Q8N119 569 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.7□□□□□ -0.54
SPG11-203ENST00000535302 RBM14Q96PK6 669 aaKnown RBP11.7□□□□□ -0.54
SPG11-203ENST00000535302 WIF1Q9Y5W5 379 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 PHF1O43189 567 aaPredicted RBP11.7□□□□□ -0.54
SPG11-203ENST00000535302 ALKAL1Q6UXT8 129 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 NOXA1Q86UR1 476 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 OR13H1Q8NG92 308 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 TMEM255BQ8WV15 326 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 TRMT61AQ96FX7 289 aaKnown RBP11.7□□□□□ -0.54
SPG11-203ENST00000535302 UBQLN4Q9NRR5 601 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 SLC2A8Q9NY64 477 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 PPP1R3CQ9UQK1 317 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 NME7Q9Y5B8 376 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 PRKNO60260 465 aaPredicted RBP11.7□□□□□ -0.54
SPG11-203ENST00000535302 SLC1A3P43003 542 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 DMWDQ09019 674 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 ZNF684Q5T5D7 378 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 FAM174AQ8TBP5 190 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 BIRC8Q96P09 236 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 TIMM29Q9BSF4 260 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 ENPP5Q9UJA9 477 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 RNF150Q9ULK6 438 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 C4BP0C0L5 1744 aa11.7□□□□□ -0.54
SPG11-203ENST00000535302 EIF3FO00303 357 aaPredicted RBP11.69□□□□□ -0.54
SPG11-203ENST00000535302 GFRA2O00451 464 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 PKDCCQ504Y2 493 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 SYT13Q7L8C5 426 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 CPNE4Q96A23 557 aaPredicted RBP11.69□□□□□ -0.54
SPG11-203ENST00000535302 PGAP2Q9UHJ9 254 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 RABL2BQ9UNT1 228 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 SRPK3Q9UPE1 567 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 GABRB3P28472 473 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 ZNF417Q8TAU3 575 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 KATNB1Q9BVA0 655 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms