RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 S1PR3Q99500 378 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 SPAG8Q99932 426 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 AGPAT1Q99943 283 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 VIPAS39Q9H9C1 493 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 CYP3A43Q9HB55 503 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 HPF1Q9NWY4 346 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 PLEK2Q9NYT0 353 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 VANGL2Q9ULK5 521 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 ICAM5Q9UMF0 924 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 PROCRQ9UNN8 238 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 PLCL2Q9UPR0 1127 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 MOKQ9UQ07 419 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 TCF19Q9Y242 345 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 NCKAP5O14513 1909 aa3.67□□□□□ -1.82
ECHDC1-223ENST00000534442 APOBP04114 4563 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 A0A087X002 238 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 A0A1B0GUS0 222 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 hCG_38984A0A1B0GV85 526 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 TSPAN11A1L157 253 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 SH3PXD2BA1X283 911 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 RGSL1A5PLK6 1076 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 GOLGA6L4A6NEF3 574 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 GOLGA6L10A6NI86 522 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 A8MUI8 341 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 NPIPB9F8W1W9 429 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 GOLGA6L19H0YKK7 550 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 SIGLEC5O15389 551 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 TXNL1O43396 289 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 OR6B1O95007 311 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 CD160O95971 181 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 IGHDP01880 384 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 SFTPBP07988 381 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 GSTA2P09210 222 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 CT45A8P0DMV1 189 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 CT45A9P0DMV2 189 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 COX6A1P12074 109 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 KRT5P13647 590 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 SELEP16581 610 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 C4BPBP20851 252 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 GPX3P22352 226 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 ANOS1P23352 680 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 EDNRAP25101 427 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 PTPN6P29350 595 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 OR1E1P30953 314 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 STIP1P31948 543 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 AP3M2P53677 418 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 OC90Q02509 493 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 BST2Q10589 180 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 MEF2DQ14814 521 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 SIX1Q15475 284 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 CCDC40Q4G0X9 1142 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 CT45A2Q5DJT8 189 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 ACER2Q5QJU3 275 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 ADAMTSL4-AS1Q5T5F5 129 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 OLFML2AQ68BL7 652 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 BLOC1S2Q6QNY1 142 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 Q6ZRP5 223 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 NDUFAF7Q7L592 441 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 NOTCH2NLQ7Z3S9 236 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 CATSPERDQ86XM0 798 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 SLC22A15Q8IZD6 547 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 RAB42Q8N4Z0 105 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 ADAD2Q8NCV1 583 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 OR4D10Q8NGI6 311 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 ZNF274Q96GC6 653 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 CAPZA3Q96KX2 299 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 CXorf58Q96LI9 332 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 COQ7Q99807 217 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 TRIM62Q9BVG3 475 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 PAPOLGQ9BWT3 736 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 SIRPDQ9H106 197 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 GANQ9H2C0 597 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 MARCH7Q9H992 704 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 BEX1Q9HBH7 125 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 SLC40A1Q9NP59 571 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 TECRQ9NZ01 308 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 MFHAS1Q9Y4C4 1052 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 LRP12Q9Y561 859 aa3.66□□□□□ -1.82
ECHDC1-223ENST00000534442 A0A1W2PP18 115 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 SURF4O15260 269 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 ANGPTL1O95841 491 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 IGSF6O95976 241 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 ZCCHC18P0CG32 403 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 TPBGLP0DKB5 382 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 GLRA1P23415 457 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 CCR1P32246 355 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 OPRL1P41146 370 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 HTD2P86397 168 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 CCZ1BP86790 482 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 CCZ1P86791 482 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 ZNF876PQ49A33 203 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 RAET1GQ6H3X3 334 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 RHBDD2Q6NTF9 364 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 RBM43Q6ZSC3 357 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 ZNF550Q7Z398 422 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 KLHDC8BQ8IXV7 354 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 CCDC197Q8NCU1 140 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 OR5T2Q8NGG2 359 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 OR6S1Q8NH40 331 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms