RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 CALHM3Q86XJ0 350 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 TMEM123Q8N131 208 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 ANKK1Q8NFD2 765 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 OR4D11Q8NGI4 311 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 OR10A6Q8NH74 314 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 MAGEE2Q8TD90 523 aaPredicted RBP12.28□□□□□ -0.44
SF3B2-215ENST00000534307 BCL2L2Q92843 193 aaPredicted RBP12.28□□□□□ -0.44
SF3B2-215ENST00000534307 TAMM41Q96BW9 452 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 TRMT61AQ96FX7 289 aaKnown RBP12.28□□□□□ -0.44
SF3B2-215ENST00000534307 MOGAT1Q96PD6 335 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 PCDHAC1Q9H158 963 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 CCDC134Q9H6E4 229 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 NANOGQ9H9S0 305 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 SAR1AQ9NR31 198 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 FAIMQ9NVQ4 179 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 SLC13A4Q9UKG4 626 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 CORINQ9Y5Q5 1042 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 HEATR1Q9H583 2144 aaKnown RBP12.28□□□□□ -0.44
SF3B2-215ENST00000534307 ARPC4-TTLL3A0A0A6YYG9 625 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 MS4A18H0YCH9 400 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 NDUFS7O75251 213 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 HPRP00739 348 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 TROVE2P10155 538 aaKnown RBP eCLIP12.27□□□□□ -0.45
SF3B2-215ENST00000534307 CDH2P19022 906 aaPredicted RBP12.27□□□□□ -0.45
SF3B2-215ENST00000534307 TTKP33981 857 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 KLF10Q13118 480 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 TNK1Q13470 666 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 MFSD13AQ14CX5 517 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 VMACQ2NL98 169 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 MS4A18Q3C1V0 323 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 TBRG1Q3YBR2 411 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 RABL3Q5HYI8 236 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 WDR88Q6ZMY6 472 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 CCDC80Q76M96 950 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 PATL1Q86TB9 770 aaKnown RBP12.27□□□□□ -0.45
SF3B2-215ENST00000534307 RBM45Q8IUH3 476 aaKnown RBP12.27□□□□□ -0.45
SF3B2-215ENST00000534307 SCAIQ8N9R8 606 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 OR8J3Q8NGG0 315 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 GTPBP3Q969Y2 492 aaKnown RBP12.27□□□□□ -0.45
SF3B2-215ENST00000534307 ZNF317Q96PQ6 595 aaPredicted RBP12.27□□□□□ -0.45
SF3B2-215ENST00000534307 OR2M2Q96R28 347 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 EPYCQ99645 322 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 MCHR1Q99705 422 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 ZNF426Q9BUY5 554 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 MRGBPQ9NV56 204 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 MRPL39Q9NYK5 338 aaKnown RBP12.27□□□□□ -0.45
SF3B2-215ENST00000534307 SELENONQ9NZV5 590 aa12.27□□□□□ -0.45
SF3B2-215ENST00000534307 CRNNQ9UBG3 495 aaPredicted RBP12.27□□□□□ -0.45
SF3B2-215ENST00000534307 ALPK2Q86TB3 2170 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 IGHV1-18A0A0C4DH31 117 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 INAFM1C9JVW0 142 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 LRRN3E7EW58 273 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 SMAD7O15105 426 aaKnown RBP12.26□□□□□ -0.45
SF3B2-215ENST00000534307 CHP2O43745 196 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 KRT33AO76009 404 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 WNT11O96014 354 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 HLA-DOBP13765 273 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 PTNP21246 168 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 CBLP22681 906 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 ARFIP2P53365 341 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 SH3BGRP55822 239 aaPredicted RBP12.26□□□□□ -0.45
SF3B2-215ENST00000534307 ROR2Q01974 943 aaKnown RBP12.26□□□□□ -0.45
SF3B2-215ENST00000534307 GUCY1A3Q02108 690 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 KRTAP1-1Q07627 177 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 CYLC2Q14093 348 aaPredicted RBP12.26□□□□□ -0.45
SF3B2-215ENST00000534307 CLEC12BQ2HXU8 276 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 ENTPD8Q5MY95 495 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 AGAP6Q5VW22 663 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 REP15Q6BDI9 236 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 ANKRD16Q6P6B7 361 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 WDFY1Q8IWB7 410 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 LRRC58Q96CX6 371 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 ZNF837Q96EG3 531 aaPredicted RBP12.26□□□□□ -0.45
SF3B2-215ENST00000534307 ALG2Q9H553 416 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 GPR35Q9HC97 309 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 CBLN4Q9NTU7 201 aa12.26□□□□□ -0.45
SF3B2-215ENST00000534307 GDF2Q9UK05 429 aaPredicted RBP12.26□□□□□ -0.45
SF3B2-215ENST00000534307 CR1P17927 2039 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 BBIP1A8MTZ0 92 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 ATP6V1G2-DDX39BF2Z307 99 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 ATP8B1O43520 1251 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 SLC43A1O75387 559 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 NPPAP01160 153 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 IGLV1-44P01699 117 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 HOXB1P14653 301 aaPredicted RBP12.25□□□□□ -0.45
SF3B2-215ENST00000534307 PAX7P23759 505 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 ACVR1BP36896 505 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 C3orf36Q3SXR2 165 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 PHYHD1Q5SRE7 291 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 INTS11Q5TA45 600 aaKnown RBP12.25□□□□□ -0.45
SF3B2-215ENST00000534307 HMBOX1Q6NT76 420 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 ZNF544Q6NX49 715 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 KLHL24Q6TFL4 600 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 DEPDC4Q8N2C3 294 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 MUC15Q8N387 334 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 FAM169BQ8N8A8 192 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 ADAMTS16Q8TE57 1224 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 SLC38A2Q96QD8 506 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 SH3GL1Q99961 368 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms