RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZP4Q12836 540 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 C1DQ13901 141 aaKnown RBP10.59□□□□□ -0.71
SSBP3-214ENST00000533209 FGD3Q5JSP0 725 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 TSPO2Q5TGU0 170 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 ZNF730Q6ZMV8 503 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 MBOAT2Q6ZWT7 520 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 MEX3DQ86XN8 651 aaKnown RBP10.59□□□□□ -0.71
SSBP3-214ENST00000533209 UEVLDQ8IX04 471 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 AQP12AQ8IXF9 295 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 ADGRG5Q8IZF4 528 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 RNF113BQ8IZP6 322 aaKnown RBP10.59□□□□□ -0.71
SSBP3-214ENST00000533209 POP5Q969H6 163 aaKnown RBP10.59□□□□□ -0.71
SSBP3-214ENST00000533209 BPIFA2Q96DR5 249 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 TRIM15Q9C019 465 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 MAGIXQ9H6Y5 334 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 SLC24A3Q9HC58 644 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 SLC7A10Q9NS82 523 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 TAS2R5Q9NYW4 299 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 MALT1Q9UDY8 824 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 KCNN3Q9UGI6 736 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 RCE1Q9Y256 329 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 NOX1Q9Y5S8 564 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 FBN2P35556 2912 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 FREM1Q5H8C1 2179 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 TRBV4-1A0A0J9YWV2 114 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 SH3D21A4FU49 640 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 C11orf98E9PRG8 122 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 PDLIM1O00151 329 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 STAMBPO95630 424 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 HIST1H2ABP04908 130 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 PRF1P14222 555 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 COX5AP20674 150 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 IGHV1-2P23083 117 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 AHCYP23526 432 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 FOXG1P55316 489 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-214ENST00000533209 SMIM11AP58511 58 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 SPIBQ01892 262 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 POU3F1Q03052 451 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-214ENST00000533209 CHRNB3Q05901 458 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 ITGADQ13349 1161 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 FHL1Q13642 323 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 FLOT2Q14254 428 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 P2RY6Q15077 328 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 SEC23BQ15437 767 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 TSC22D1Q15714 1073 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 FAM98BQ52LJ0 330 aaKnown RBP10.58□□□□□ -0.72
SSBP3-214ENST00000533209 SFRP5Q5T4F7 317 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 ANKRD34AQ69YU3 496 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 CCDC121Q6ZUS5 278 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 C22orf34Q6ZV56 151 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 ASRGL1Q7L266 308 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 HIST3H2AQ7L7L0 130 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 NANOGNBQ7Z5D8 188 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 PXKQ7Z7A4 578 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 WDFY1Q8IWB7 410 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 UBE2J2Q8N2K1 259 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 OR52J3Q8NH60 311 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 FAM222BQ8WU58 562 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 HIST1H2ACQ93077 130 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 TXNDC15Q96J42 360 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 WFIKKN1Q96NZ8 548 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 ZNF347Q96SE7 839 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 SLCO5A1Q9H2Y9 848 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 MED29Q9NX70 200 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 GPR52Q9Y2T5 361 aa10.58□□□□□ -0.72
SSBP3-214ENST00000533209 TCRBV3S1A0A5B6 114 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 SH3PXD2BA1X283 911 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 BLOC1S5-TXNDC5H3BN57 136 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 RNF13O43567 381 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 LYZL6O75951 148 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 OR6A2O95222 327 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 GADD45GO95257 159 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 RAP2AP10114 183 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 EPXP11678 715 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 RRM2P31350 389 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 LIMS1P48059 325 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 RPS4XP62701 263 aaKnown RBP10.57□□□□□ -0.72
SSBP3-214ENST00000533209 RPL18Q07020 188 aaKnown RBP10.57□□□□□ -0.72
SSBP3-214ENST00000533209 LGALS3BPQ08380 585 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 FAPQ12884 760 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 NIPAL3Q6P499 406 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 TMPRSS11FQ6ZWK6 438 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 RRM2BQ7LG56 351 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 TMEM123Q8N131 208 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 ZNF433Q8N7K0 673 aaPredicted RBP10.57□□□□□ -0.72
SSBP3-214ENST00000533209 POMGNT2Q8NAT1 580 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 ANKK1Q8NFD2 765 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 OR4K5Q8NGD3 323 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 MOSPD2Q8NHP6 518 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 CANT1Q8WVQ1 401 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 KISS1RQ969F8 398 aaPredicted RBP10.57□□□□□ -0.72
SSBP3-214ENST00000533209 C14orf79Q96F83 325 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 DACH2Q96NX9 599 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 OR2M2Q96R28 347 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 HDHD5Q9BXW7 423 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 LINC00470Q9BZP3 86 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 ACTR6Q9GZN1 396 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 OR10A4Q9H209 315 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 MMADHCQ9H3L0 296 aaPredicted RBP10.57□□□□□ -0.72
SSBP3-214ENST00000533209 ASB6Q9NWX5 421 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms