RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TMED7-TICAM2A0A0A6YYA0 188 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 ETV2O00321 342 aaPredicted RBP16.66■□□□□ 0.26
SMPD1-208ENST00000533123 GABARAPO95166 117 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 ZNF12P17014 697 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 HK1P19367 917 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 IL11P20809 199 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 SLC6A6P31641 620 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 SPCS2Q15005 226 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 ZNF74Q16587 644 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 ZNF362Q5T0B9 420 aaPredicted RBP16.66■□□□□ 0.26
SMPD1-208ENST00000533123 ZNF367Q7RTV3 350 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 RPL3LQ92901 407 aaKnown RBP16.66■□□□□ 0.26
SMPD1-208ENST00000533123 MRGPRX4Q96LA9 322 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 UBL7Q96S82 380 aaPredicted RBP16.66■□□□□ 0.26
SMPD1-208ENST00000533123 TTTY12Q9BZ98 90 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 C12orf10Q9HB07 376 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 CMC2Q9NRP2 79 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 DIMT1Q9UNQ2 313 aaKnown RBP16.66■□□□□ 0.26
SMPD1-208ENST00000533123 BSNQ9UPA5 3926 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 TMED7Q9Y3B3 224 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 TRAV17A0A0B4J275 112 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 TRAPPC6AO75865 159 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 RAB36O95755 333 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 GDF1P27539 372 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 HTR3AP46098 478 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 ETV1P50549 477 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 PSMD7P51665 324 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 LTBQ06643 244 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 NFATC3Q12968 1075 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 SLC25A53Q5H9E4 307 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 ARMCX4Q5H9R4 360 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 NXNL2Q5VZ03 156 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 DCDC5Q6ZRR9 648 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 CYB561A3Q8NBI2 242 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 ATP6V1C2Q8NEY4 427 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 LSM2Q9Y333 95 aaKnown RBP16.65■□□□□ 0.26
SMPD1-208ENST00000533123 ZNF337Q9Y3M9 751 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 ADAM18Q9Y3Q7 739 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 TMEM72A0PK05 275 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 SNTNA6NMZ2 147 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 FAM166BA8MTA8 275 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 EFNA2O43921 213 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 SUSD5O60279 629 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 NDUFB2O95178 105 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 ZNF182P17025 639 aaPredicted RBP16.65■□□□□ 0.26
SMPD1-208ENST00000533123 NOS3P29474 1203 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 SRD5A2P31213 254 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 APOBEC1P41238 236 aaKnown RBP16.65■□□□□ 0.26
SMPD1-208ENST00000533123 DLX5P56178 289 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 PLGLB1Q02325 96 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 MOGQ16653 247 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 C1QL3Q5VWW1 255 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 YRDCQ86U90 279 aaKnown RBP16.65■□□□□ 0.26
SMPD1-208ENST00000533123 RFKQ969G6 155 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 ZBTB8AQ96BR9 441 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 ERMAPQ96PL5 475 aaPredicted RBP16.65■□□□□ 0.26
SMPD1-208ENST00000533123 MRPS18AQ9NVS2 196 aaKnown RBP16.65■□□□□ 0.26
SMPD1-208ENST00000533123 ERGIC3Q9Y282 383 aa16.65■□□□□ 0.26
SMPD1-208ENST00000533123 A0A087WZY1 265 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 ITGB2P05107 769 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 RPS5P46782 204 aaKnown RBP16.64■□□□□ 0.25
SMPD1-208ENST00000533123 RPS4XP62701 263 aaKnown RBP16.64■□□□□ 0.25
SMPD1-208ENST00000533123 RAB40BQ12829 278 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 RAET1LQ5VY80 246 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 NIPAL3Q6P499 406 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 KDF1Q8NAX2 398 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-208ENST00000533123 ZFP62Q8NB50 900 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-208ENST00000533123 OR4F15Q8NGB8 312 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 MOSPD2Q8NHP6 518 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 ZNF703Q9H7S9 590 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-208ENST00000533123 CHRNA9Q9UGM1 479 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 TMEM8BA6NDV4 472 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 CLUP10909 449 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 PEPDP12955 493 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 HTR1FP30939 366 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 RPL4P36578 427 aaKnown RBP16.64■□□□□ 0.25
SMPD1-208ENST00000533123 TGFBR1P36897 503 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 EIF1P41567 113 aaKnown RBP16.64■□□□□ 0.25
SMPD1-208ENST00000533123 BMXP51813 675 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 CRMP1Q14194 572 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 KLHL22Q53GT1 634 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 FAM83FQ8NEG4 500 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-208ENST00000533123 OR14L1PQ8NHC6 308 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 PTP4A1Q93096 173 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 TAAR8Q969N4 342 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 MGLLQ99685 303 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 MFRPQ9BY79 579 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 OR11A1Q9GZK7 315 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 TMEM185BQ9H7F4 350 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 NANSQ9NR45 359 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 B4GALT7Q9UBV7 327 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 TP53TG5Q9Y2B4 290 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 PCDHGB6Q9Y5F9 930 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 IER3IP1Q9Y5U9 82 aa16.64■□□□□ 0.25
SMPD1-208ENST00000533123 FUOMA2VDF0 154 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 RIIAD1A6NNX1 92 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 BLOC1S5-TXNDC5H3BN57 136 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 OPN1LWP04000 364 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 CELA3AP09093 270 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 FAM87AP0C7U9 286 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms