RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 MT-ATP6P00846 226 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 OR1E2P47887 323 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 GSK3BP49841 420 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 SELENOWP63302 87 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 BSPH1Q075Z2 132 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 PMS2P3Q13401 168 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 DEF8Q6ZN54 512 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 C17orf78Q8N4C9 275 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 PRSS27Q9BQR3 290 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 ZNF426Q9BUY5 554 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 LINC00470Q9BZP3 86 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 POLR2J2Q9GZM3 115 aaKnown RBP13.5□□□□□ -0.25
CPSF1-210ENST00000532935 POLR2J3Q9H1A7 115 aaKnown RBP13.5□□□□□ -0.25
CPSF1-210ENST00000532935 BEX4Q9NWD9 120 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-210ENST00000532935 NPAP1Q9NZP6 1156 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 ABCD2Q9UBJ2 740 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 SLC25A15Q9Y619 301 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 A0A1W2PR80 420 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 ZNF587BE7ETH6 402 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 CXCR6O00574 342 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 KPNA4O00629 521 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-210ENST00000532935 PLPP3O14495 311 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 HS3ST1O14792 307 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 GSTA4O15217 222 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 CLOCKO15516 846 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 UPK3AO75631 287 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 OR5F1O95221 314 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 HLA-DOBP13765 273 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 TAS2R41P59536 307 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 PSME3P61289 254 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 PUDPQ08623 228 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 PIN1Q13526 163 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-210ENST00000532935 ZNF74Q16587 644 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 LINGO2Q7L985 606 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 UEVLDQ8IX04 471 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 FITM2Q8N6M3 262 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 WDR31Q8NA23 367 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 OR5J2Q8NH18 312 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 LZICQ8WZA0 190 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 AKAP1Q92667 903 aaKnown RBP eCLIP13.49□□□□□ -0.25
CPSF1-210ENST00000532935 PIGTQ969N2 578 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 ALKBH3Q96Q83 286 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-210ENST00000532935 CCL19Q99731 98 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 PIP5K1AQ99755 562 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 SLC19A3Q9BZV2 496 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 SLC17A5Q9NRA2 495 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 RIMS3Q9UJD0 308 aa13.49□□□□□ -0.25
CPSF1-210ENST00000532935 FLNAP21333 2647 aaKnown RBP13.48□□□□□ -0.25
CPSF1-210ENST00000532935 AKAP8O43823 692 aaKnown RBP13.48□□□□□ -0.25
CPSF1-210ENST00000532935 SLC43A1O75387 559 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 CH25HO95992 272 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 CDH2P19022 906 aaPredicted RBP13.48□□□□□ -0.25
CPSF1-210ENST00000532935 ZNF83P51522 516 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 POU3F1Q03052 451 aaPredicted RBP13.48□□□□□ -0.25
CPSF1-210ENST00000532935 BNIP1Q12981 228 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 KRT72Q14CN4 511 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 ADAM5Q6NVV9 412 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 VTCN1Q7Z7D3 282 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 NKAIN4Q8IVV8 208 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 LILRB1Q8NHL6 650 aaPredicted RBP13.48□□□□□ -0.25
CPSF1-210ENST00000532935 BOD1Q96IK1 185 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 OR2M2Q96R28 347 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 KCTD14Q9BQ13 255 aaPredicted RBP13.48□□□□□ -0.25
CPSF1-210ENST00000532935 FKRPQ9H9S5 495 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 NANSQ9NR45 359 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 AMDHD2Q9Y303 409 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 NOX1Q9Y5S8 564 aa13.48□□□□□ -0.25
CPSF1-210ENST00000532935 OR6A2O95222 327 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 ZNF682O95780 498 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 ADORA3P0DMS8 318 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 THRBP10828 461 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 AHCYP23526 432 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 HOXC12P31275 282 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 RBM34P42696 430 aaKnown RBP13.47□□□□□ -0.25
CPSF1-210ENST00000532935 RASSF2P50749 326 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 UGT2B15P54855 530 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 SLC25A3Q00325 362 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 ROR2Q01974 943 aaKnown RBP13.47□□□□□ -0.25
CPSF1-210ENST00000532935 ZNF672Q499Z4 452 aaPredicted RBP13.47□□□□□ -0.25
CPSF1-210ENST00000532935 HIKESHIQ53FT3 197 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 C1QTNF12Q5T7M4 302 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 HMBOX1Q6NT76 420 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 KLHL17Q6TDP4 642 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 TMEM108Q6UXF1 575 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 NHLRC1Q6VVB1 395 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 CBLL1Q75N03 491 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 PXKQ7Z7A4 578 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 TMEM123Q8N131 208 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 ZNF611Q8N823 705 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 KBTBD8Q8NFY9 601 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 OR1K1Q8NGR3 316 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 TMEM255BQ8WV15 326 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 NEUROG1Q92886 237 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 SPAG4Q9NPE6 437 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 MEPEQ9NQ76 525 aaPredicted RBP13.47□□□□□ -0.25
CPSF1-210ENST00000532935 ZNF229Q9UJW7 825 aa13.47□□□□□ -0.25
CPSF1-210ENST00000532935 C11orf98E9PRG8 122 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 RPL36A-HNRNPH2H7BZ11 118 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 ABCD4O14678 606 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 SMPD2O60906 423 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms