RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 TMEM139Q8IV31 216 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 SLC39A11Q8N1S5 342 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 TMEM251Q8N6I4 163 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 OR5R1Q8NH85 324 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 DYNC2LI1Q8TCX1 351 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 BLOC1S5Q8TDH9 187 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 NEK7Q8TDX7 302 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 CHRNA10Q9GZZ6 450 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 DEFB129Q9H1M3 183 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 KLRF1Q9NZS2 232 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 YARS2Q9Y2Z4 477 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 KIF20BQ96Q89 1820 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 CACNA1FO60840 1977 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 CD109Q6YHK3 1445 aa4.63□□□□□ -1.67
ECHDC1-222ENST00000531967 A0A0G2JLL6 359 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 TRBV7-9A0A0J9YWB2 115 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 PVALEFA0A1B0GWK0 134 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 WDR27A2RRH5 827 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 H0YIZ8 118 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 M0R036 132 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 SLC16A4O15374 487 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 RNASEH1O60930 286 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 ATP5LO75964 103 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 SNAP29O95721 258 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 CD160O95971 181 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 TCRBP04435 133 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 CALB1P05937 261 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 DPEP1P16444 411 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 GCAP28676 217 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 SPDYE7PQ495Y7 208 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 EMBQ6PCB8 327 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 Q6ZNX1 250 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 ASCL5Q7RTU5 278 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 C17orf64Q86WR6 236 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 FAM71AQ8IYT1 594 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 PRR26Q8N8Z3 221 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 LHFPL5Q8TAF8 219 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 GPR148Q8TDV2 347 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 SMAP2Q8WU79 429 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 EME1Q96AY2 570 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 FAF2Q96CS3 445 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 WDR34Q96EX3 536 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 FAM89AQ96GI7 184 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 CENPNQ96H22 339 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 LGMNQ99538 433 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 NEURL2Q9BR09 285 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 TM2D2Q9BX73 214 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 ZCCHC4Q9H5U6 513 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 BEX1Q9HBH7 125 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 PNRC2Q9NPJ4 139 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 PARVAQ9NVD7 372 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 NLE1Q9NVX2 485 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 GMPR2Q9P2T1 348 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 SLC17A4Q9Y2C5 497 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 ZNF337Q9Y3M9 751 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 ALG6Q9Y672 507 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 DLG5Q8TDM6 1919 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 ZNF98A6NK75 572 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 RNASET2O00584 256 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 PPP1R2P9O14990 202 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 TTLL1O95922 423 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 IGHG3P01860 377 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 GSTA1P08263 222 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 PRSS56P0CW18 603 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 NQO1P15559 274 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 IGFBP6P24592 240 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 SERPINB1P30740 379 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 HOXA7P31268 230 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 TNFSF8P32971 234 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 MAGEA3P43357 314 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 QARSP47897 775 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 GNG2P59768 71 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 OPCMLQ14982 345 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 SLC9A3R2Q15599 337 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 ISXQ2M1V0 245 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 TMEM35AQ53FP2 167 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 GCSAMLQ5JQS6 135 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 BRMS1LQ5PSV4 323 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 TIMM23BQ5SRD1 257 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 HES5Q5TA89 166 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 SDHAF4Q5VUM1 108 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 PRR5LQ6MZQ0 368 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 SLC25A47Q6Q0C1 308 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 LYPD4Q6UWN0 246 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 COX15Q7KZN9 410 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 SHFQ7M4L6 423 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 SSX7Q7RTT5 188 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 SSX6Q7RTT6 188 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 BBS7Q8IWZ6 715 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 OR4K2Q8NGD2 314 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 OR2D3Q8NGH3 330 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 OR2Y1Q8NGV0 311 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 OR52N1Q8NH53 320 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 RNASEH2CQ8TDP1 164 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 UBE2E3Q969T4 207 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 PTH2Q96A98 100 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 FBXO17Q96EF6 278 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 TXNDC15Q96J42 360 aa4.62□□□□□ -1.67
ECHDC1-222ENST00000531967 DCTN5Q9BTE1 182 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms