RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 CCR9P51686 369 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 RAB11AP62491 216 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ERV3-1Q14264 604 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 PLGLAQ15195 96 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 AANATQ16613 207 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 Q6ZTK2 550 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 PRICKLE2Q7Z3G6 844 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 TMEM255BQ8WV15 326 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 SFT2D1Q8WV19 159 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ZNF480Q8WV37 535 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 TMEM40Q8WWA1 233 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 SLC25A46Q96AG3 418 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 KIAA1143Q96AT1 154 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 IGSF21Q96ID5 467 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ZFYVE21Q9BQ24 234 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 OPA3Q9H6K4 179 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 SAGE1Q9NXZ1 904 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 TMEM221A6NGB7 291 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 PRKRAO75569 313 aaKnown RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ZIC2O95409 532 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 AOAHP28039 575 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 DAP3P51398 398 aaKnown RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 BAXQ07812 192 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 MFGE8Q08431 387 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 SELENBP1Q13228 472 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 SAXO2Q658L1 398 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 KDM4DQ6B0I6 523 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 MOB3CQ70IA8 216 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 BTLAQ7Z6A9 289 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 SPNS2Q8IVW8 549 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 FAM185AQ8N0U4 392 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 PELI3Q8N2H9 469 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 LKAAEAR1Q8TD35 194 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 HHIPQ96QV1 700 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 MYADMQ96S97 322 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 PDCD1LG2Q9BQ51 273 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 HOXD1Q9GZZ0 328 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 CHRDQ9H2X0 955 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 GPR34Q9UPC5 381 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 URB1O60287 2271 aaKnown RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 TCRBV21S2A2A0A5A6 115 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 SPI1P17947 270 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 OPRD1P41143 372 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 TAS2R46P59540 309 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 OR52I2Q8NH67 350 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 OR14L1PQ8NHC6 308 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 UBXN10Q96LJ8 280 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 DCLRE1CQ96SD1 692 aaKnown RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 FAM103A1Q9BTL3 118 aaKnown RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ALG12Q9BV10 488 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 EXO1Q9UQ84 846 aaKnown RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 TRDV1A0A1B0GX56 115 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 FITM1A5D6W6 292 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 OR7C1O76099 320 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 GLI4P10075 376 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 FCGR2AP12318 317 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 LAP3P28838 519 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 SLC19A1P41440 591 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 HTR3AP46098 478 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 SLC35A2P78381 396 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ASAH1Q13510 395 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ELAVL3Q14576 367 aaKnown RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ZNF239Q16600 458 aaKnown RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 EOGTQ5NDL2 527 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 TMEM182Q6ZP80 229 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 RBM45Q8IUH3 476 aaKnown RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 LRRC18Q8N456 261 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 OR6M1Q8NGM8 313 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 OR1E3Q8WZA6 343 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 SLCO4A1Q96BD0 722 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ZNF775Q96BV0 537 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ARHGAP9Q9BRR9 750 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 SEMA4CQ9C0C4 833 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 CHST11Q9NPF2 352 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 CHST2Q9Y4C5 530 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 A6NIZ1 184 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 GPRIN2O60269 458 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 PAPLNO95428 1278 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 IMPA1P29218 277 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 BLVRBP30043 206 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 TRHRP34981 398 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 RAP1BP61224 184 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 RAP1AP62834 184 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 AQP6Q13520 282 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ELOCQ15369 112 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 HAGHQ16775 308 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 PHLDA2Q53GA4 152 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ACTBL2Q562R1 376 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 TRIM61Q5EBN2 209 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 AADACL3Q5VUY0 350 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 FAM199XQ6PEV8 388 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 BRICD5Q6PL45 260 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 LCTLQ6UWM7 567 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 PTRH1Q86Y79 214 aaKnown RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ZNF511Q8NB15 262 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 DYNC2LI1Q8TCX1 351 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 PGAP3Q96FM1 320 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-223ENST00000529986 LRIG1Q96JA1 1093 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 RHNO1Q9BSD3 238 aa7.08□□□□□ -1.28
CTNND1-223ENST00000529986 ATP13A2Q9NQ11 1180 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms