RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 STMN4Q9H169 189 aaPredicted RBP2.81□□□□□ -1.96
CTR9-204ENST00000529355 LRRN3Q9H3W5 708 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 RBKSQ9H477 322 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 CLSTN2Q9H4D0 955 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 RMND5AQ9H871 391 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 PATZ1Q9HBE1 687 aaKnown RBP2.81□□□□□ -1.96
CTR9-204ENST00000529355 PARVGQ9HBI0 331 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 BATF3Q9NR55 127 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.81□□□□□ -1.96
CTR9-204ENST00000529355 FKBP14Q9NWM8 211 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 THUMPD1Q9NXG2 353 aaKnown RBP2.81□□□□□ -1.96
CTR9-204ENST00000529355 PIPOXQ9P0Z9 390 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 CLCF1Q9UBD9 225 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 RNF14Q9UBS8 474 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 SEC14L3Q9UDX4 400 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 SH3BGRL2Q9UJC5 107 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 PTBP2Q9UKA9 531 aaKnown RBP2.81□□□□□ -1.96
CTR9-204ENST00000529355 PAIP2BQ9ULR5 123 aaKnown RBP2.81□□□□□ -1.96
CTR9-204ENST00000529355 GMEB1Q9Y692 573 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 MAP3K15Q6ZN16 1313 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 ROCK2O75116 1388 aaKnown RBP2.81□□□□□ -1.96
CTR9-204ENST00000529355 PLEKHG2Q9H7P9 1386 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 UHRF1BP1LA0JNW5 1464 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 ATAD2BQ9ULI0 1458 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 KIAA1107Q9UPP5 1409 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 RPAP1Q9BWH6 1393 aaPredicted RBP2.8□□□□□ -1.96
CTR9-204ENST00000529355 CCDC171Q6TFL3 1326 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 IGLV3-16A0A075B6K0 115 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 ARPC4-TTLL3A0A0A6YYG9 625 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 RSPH10B2B2RC85 870 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 HIP1O00291 1037 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 LSM1O15116 133 aaKnown RBP2.8□□□□□ -1.96
CTR9-204ENST00000529355 ARPC3O15145 178 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 CETN3O15182 167 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 SULT1B1O43704 296 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 DFNA5O60443 496 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 ZNF189O75820 626 aaPredicted RBP2.8□□□□□ -1.96
CTR9-204ENST00000529355 RSPH10BP0C881 870 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 PSMA5P28066 241 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 FMO3P31513 532 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 KIR2DS4P43632 304 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 DLX1P56177 255 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 LINC00315P59091 139 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 KRTAP10-1P60331 282 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 PTGES3Q15185 160 aaKnown RBP2.8□□□□□ -1.96
CTR9-204ENST00000529355 DUSP7Q16829 419 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 IMMTQ16891 758 aaKnown RBP2.8□□□□□ -1.96
CTR9-204ENST00000529355 CAVIN4Q5BKX8 364 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 CCDC183Q5T5S1 534 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 GPR157Q5UAW9 335 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 THOC7Q6I9Y2 204 aaKnown RBP2.8□□□□□ -1.96
CTR9-204ENST00000529355 C1orf94Q6P1W5 598 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 KDELC1Q6UW63 502 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 ZFP2Q6ZN57 461 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 Q6ZN92 141 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 THOC6Q86W42 341 aaKnown RBP2.8□□□□□ -1.96
CTR9-204ENST00000529355 SPATA24Q86W54 205 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 VSTM4Q8IW00 320 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 C10orf67Q8IYJ2 551 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 ZNF683Q8IZ20 524 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 RNF10Q8N5U6 811 aaKnown RBP2.8□□□□□ -1.96
CTR9-204ENST00000529355 GMCL1P1Q8NEA9 526 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 CCDC148Q8NFR7 591 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 OR52K2Q8NGK3 314 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 ANKRD7Q92527 254 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 RBM14Q96PK6 669 aaKnown RBP2.8□□□□□ -1.96
CTR9-204ENST00000529355 TRIM4Q9C037 500 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 RIBC2Q9H4K1 309 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 VPS37BQ9H9H4 285 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 TMEM165Q9HC07 324 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 ZFP14Q9HCL3 533 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 DEC1Q9P2X7 70 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 ATPIF1Q9UII2 106 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 ATP6V1DQ9Y5K8 247 aa2.8□□□□□ -1.96
CTR9-204ENST00000529355 MAP3K5Q99683 1374 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 A0A0G2JN53 185 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 IGHV3-64DA0A0J9YX35 117 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 TCRBV9S1A1TA0A576 114 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 NDUFAB1O14561 156 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 AGPAT2O15120 278 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 YKT6O15498 198 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 RIPK2O43353 540 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 UGT1A9O60656 530 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 KLHL41O60662 606 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 N4BP1O75113 896 aaKnown RBP2.79□□□□□ -1.96
CTR9-204ENST00000529355 IDH1O75874 414 aaKnown RBP2.79□□□□□ -1.96
CTR9-204ENST00000529355 DIRAS1O95057 198 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 PAHP00439 452 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 OTX2P32243 289 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 GPM6AP51674 278 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 EFNB2P52799 333 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 PLD1Q13393 1074 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 DYNC1I2Q13409 638 aaKnown RBP2.79□□□□□ -1.96
CTR9-204ENST00000529355 RIPK1Q13546 671 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 MAPRE2Q15555 327 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 ATP6AP1Q15904 470 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 PARP15Q460N3 678 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 C1orf220Q5T0J3 134 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 BEND3Q5T5X7 828 aa2.79□□□□□ -1.96
CTR9-204ENST00000529355 GALNT17Q6IS24 598 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms