RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 NTF4P34130 210 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 MAP2K6P52564 334 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 ARFIP2P53365 341 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 CDK6Q00534 326 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 SF3A3Q12874 501 aaKnown RBP eCLIP7.46□□□□□ -1.22
SSBP3-212ENST00000528930 SCARB2Q14108 478 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 PDK3Q15120 406 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 GCNT6Q5T4J0 391 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 ANKRD34AQ69YU3 496 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 WBP2NLQ6ICG8 309 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 REEP3Q6NUK4 255 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 ZNF550Q7Z398 422 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 SPATA21Q7Z572 469 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 SERPINA11Q86U17 422 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 PTOV1Q86YD1 416 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 FAM81AQ8TBF8 368 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 SLC35B4Q969S0 331 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 C3orf49Q96BT1 292 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 CGREF1Q99674 301 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 KLHL4Q9C0H6 718 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 VCX3BQ9H321 246 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 MMADHCQ9H3L0 296 aaPredicted RBP7.46□□□□□ -1.22
SSBP3-212ENST00000528930 VCX3AQ9NNX9 186 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 CHCHD3Q9NX63 227 aaKnown RBP7.46□□□□□ -1.22
SSBP3-212ENST00000528930 TMEM181Q9P2C4 612 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 KLHL9Q9P2J3 617 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 CORO2BQ9UQ03 480 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 TRAPPC4Q9Y296 219 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 CMYA5Q8N3K9 4069 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 IGKV3D-15A0A087WSY6 115 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 MAGEA13PA6NCF6 341 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 C5orf58C9J3I9 102 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 CASKO14936 926 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 KLF4O43474 513 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 DNPH1O43598 174 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 GPRIN2O60269 458 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 NPIPB7O75200 414 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 DCTN3O75935 186 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 TROVE2P10155 538 aaKnown RBP eCLIP7.45□□□□□ -1.22
SSBP3-212ENST00000528930 UQCRBP14927 111 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 PSMB1P20618 241 aaKnown RBP7.45□□□□□ -1.22
SSBP3-212ENST00000528930 CXCR1P25024 350 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 PRKAR1BP31321 381 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 OR3A2P47893 321 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 GZMMP51124 257 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 SLC16A1P53985 500 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 PCBP3P57721 371 aaKnown RBP7.45□□□□□ -1.22
SSBP3-212ENST00000528930 MTPNP58546 118 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 MXRA7P84157 204 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 HOXC5Q00444 222 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 BNIP2Q12982 314 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 KLF10Q13118 480 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 DHRS4L2Q6PKH6 230 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 ATG4DQ86TL0 474 aaPredicted RBP7.45□□□□□ -1.22
SSBP3-212ENST00000528930 STK32CQ86UX6 486 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 CCDC103Q8IW40 242 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 CADM2Q8N3J6 435 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 ARIH2OSQ8N7S6 290 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 HIPK4Q8NE63 616 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 DDIT4LQ96D03 193 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 ZC3HAV1LQ96H79 300 aaKnown RBP7.45□□□□□ -1.22
SSBP3-212ENST00000528930 WFDC6Q9BQY6 131 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 MED18Q9BUE0 208 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 POTEKPQ9BYX7 375 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 OR10A4Q9H209 315 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 ARMC7Q9H6L4 198 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 KAT8Q9H7Z6 458 aaKnown RBP7.45□□□□□ -1.22
SSBP3-212ENST00000528930 ZNF226Q9NYT6 803 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 C6orf203Q9P0P8 240 aaPredicted RBP7.45□□□□□ -1.22
SSBP3-212ENST00000528930 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.45□□□□□ -1.22
SSBP3-212ENST00000528930 PRSS50Q9UI38 385 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 SCOCQ9UIL1 159 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 GPR52Q9Y2T5 361 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 CADP27708 2225 aa7.45□□□□□ -1.22
SSBP3-212ENST00000528930 PRR14LQ5THK1 2151 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 TMEM89A2RUT3 159 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 DPPA5A6NC42 116 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 LIPT2A6NK58 231 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 A8MVM7 634 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 FXYD1O00168 92 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 TPST2O60704 377 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 EIF1BO60739 113 aaKnown RBP7.44□□□□□ -1.22
SSBP3-212ENST00000528930 MFN2O95140 757 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 VENTXO95231 258 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 ADAP00813 363 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 PPP3CBP16298 524 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 SLC6A2P23975 617 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 IGFBP5P24593 272 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 HTR2AP28223 471 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 AQP1P29972 269 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 VHLP40337 213 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 P2RY4P51582 365 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 OR2B6P58173 313 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 COPZ1P61923 177 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 SLC35A1P78382 337 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 VLDLRP98155 873 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 EGR4Q05215 589 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 RBBP4Q09028 425 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 NFYCQ13952 458 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 CEACAM7Q14002 265 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms