RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 UBQLN3Q9H347 655 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 WDR54Q9H977 334 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 GALNT9Q9HCQ5 603 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 FAM86C1Q9NVL1 165 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 ZFHX2Q9C0A1 2572 aaPredicted RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 CNOT1A5YKK6 2376 aaKnown RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 A0A1W2PQ72 361 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 EFCAB10A6NFE3 127 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 B4E171 279 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 ALG1L2C9J202 215 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 SMAD9O15198 467 aaKnown RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 ATXN7O15265 892 aaPredicted RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 CDC40O60508 579 aaKnown RBP eCLIP7.02□□□□□ -1.29
SOX6-211ENST00000528429 SERPINI2O75830 405 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 KLF7O75840 302 aaPredicted RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 OR2J2O76002 312 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 ZFAND5O76080 213 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 ONECUT2O95948 504 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 APOC1P02654 83 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 UMODP07911 640 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 NR4A2P43354 598 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 AP2S1P53680 142 aaPredicted RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 FXYD6P3P58550 94 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 BICRALQ6AI39 1079 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 WBP2NLQ6ICG8 309 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 LRRC17Q8N6Y2 441 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 FAM71CQ8NEG0 241 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 C17orf47Q8NEP4 570 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 WDR36Q8NI36 951 aaKnown RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 TMEM163Q8TC26 289 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 FAM216AQ8WUB2 273 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 ZNF582Q96NG8 517 aaPredicted RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 TNFRSF13CQ96RJ3 184 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 SLC25A19Q9HC21 320 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 PLSCR4Q9NRQ2 329 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 PADI1Q9ULC6 663 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 A0A087WUJ7 227 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 TRBV23-1A0A0A0MS06 115 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 OR6C70A6NIJ9 312 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 TMX2-CTNND1H3BSU7 103 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 J3QRK9 145 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 PLD2O14939 933 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 HCN1O60741 890 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 PPM1BO75688 479 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 RCBTB2O95199 551 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 ATE1O95260 518 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 PTHP01270 115 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 FABP1P07148 127 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 NR2C1P13056 603 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 TCN2P20062 427 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 MST1P26927 711 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 TACR3P29371 465 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 OTX2P32243 289 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 NUP62P37198 522 aaPredicted RBP7.01□□□□□ -1.29
SOX6-211ENST00000528429 FOLR3P41439 243 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 RBM34P42696 430 aaKnown RBP7.01□□□□□ -1.29
SOX6-211ENST00000528429 RPL35P42766 123 aaKnown RBP7.01□□□□□ -1.29
SOX6-211ENST00000528429 OR3A3P47888 321 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 BMXP51813 675 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 LSM3P62310 102 aaKnown RBP7.01□□□□□ -1.29
SOX6-211ENST00000528429 E2F1Q01094 437 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 ITGADQ13349 1161 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 SLC22A25Q6T423 547 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 TMPRSS11FQ6ZWK6 438 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 SHFQ7M4L6 423 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 CYP4Z2PQ8N1L4 340 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 FAM109AQ8N4B1 249 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 OR5L2Q8NGL0 311 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 OR2Y1Q8NGV0 311 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 OR5H6Q8NGV6 325 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 TP53INP1Q96A56 240 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 SGTBQ96EQ0 304 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 ZNF426Q9BUY5 554 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 FUNDC2Q9BWH2 189 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 MED20Q9H944 212 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 FAM212BQ9NTI7 297 aaPredicted RBP7.01□□□□□ -1.29
SOX6-211ENST00000528429 KLRF1Q9NZS2 232 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 MYOTQ9UBF9 498 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 DAPK2Q9UIK4 370 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 SIGLEC7Q9Y286 467 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 RPL36Q9Y3U8 105 aaKnown RBP7.01□□□□□ -1.29
SOX6-211ENST00000528429 HS3ST3B1Q9Y662 390 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 CNTRLQ7Z7A1 2325 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 PCNX2A6NKB5 2137 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 CELSR3Q9NYQ7 3312 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 TMEM200CA6NKL6 621 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 H3BMQ9 156 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 SURF4O15260 269 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 PPP1R3DO95685 299 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 RAB3DO95716 219 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 DHFRP00374 187 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 MT-CO3P00414 261 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 KRT8P05787 483 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 ADRA2AP08913 450 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 TUBG1P23258 451 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 RPL4P36578 427 aaKnown RBP7.01□□□□□ -1.29
SOX6-211ENST00000528429 AKR1D1P51857 326 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 SLC16A1P53985 500 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 CTBP2P56545 445 aa7.01□□□□□ -1.29
SOX6-211ENST00000528429 SPCS3P61009 180 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms