RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 TBX1O43435 398 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 SLC19A2O60779 497 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 SC5DO75845 299 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 CLEC2LP0C7M8 214 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 PRKCAP17252 672 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 FBXW4P57775 412 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 RPL27P61353 136 aaKnown RBP13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 NTRK2Q16620 822 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 ZNF517Q6ZMY9 492 aaPredicted RBP13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 PXKQ7Z7A4 578 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 ZNF554Q86TJ5 538 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 OR6K6Q8NGW6 343 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 ASB15Q8WXK1 588 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 MR1Q95460 341 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 ZNF524Q96C55 264 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 SMIM19Q96E16 107 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 MRGPRX4Q96LA9 322 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 TSPAN32Q96QS1 320 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 RERGLQ9H628 205 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 MARCH7Q9H992 704 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 RPRD1BQ9NQG5 326 aaKnown RBP13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 SERINC1Q9NRX5 453 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 SLC39A1Q9NY26 324 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 ST6GALNAC2Q9UJ37 374 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 ZMIZ1Q9ULJ6 1067 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 SIRT4Q9Y6E7 314 aaPredicted RBP13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 TRAV1-2A0A0B4J238 106 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 FABP12A6NFH5 140 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 A6NIZ1 184 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 CD8B2A6NJW9 211 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 FAM47E-STBD1D6RA91 191 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 ARL6IP5O75915 188 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 F13BP05160 661 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 CD8BP10966 210 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 MPLP40238 635 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 BCAP31P51572 246 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 ZNF41P51814 821 aaPredicted RBP13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 RAP1BP61224 184 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 RAP1AP62834 184 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 CDK5R1Q15078 307 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 PCOLCEQ15113 449 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 EEF1A1P5Q5VTE0 462 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 FAM205BPQ63HN1 556 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 STEAP3Q658P3 488 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 LCN10Q6JVE6 187 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 LYPD8Q6UX82 237 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 CEACAM19Q7Z692 300 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 SLC22A16Q86VW1 577 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 OR2Y1Q8NGV0 311 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 PGLYRP3Q96LB9 341 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 KLHL15Q96M94 604 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 TTYH2Q9BSA4 534 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 ABCB9Q9NP78 766 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 KLRF1Q9NZS2 232 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 PPP4R1LQ9P1A2 415 aa13.37□□□□□ -0.27
ECHDC1-220ENST00000528402 A0A1W2PQ72 361 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 A0A1W2PRG6 482 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 FUOMA2VDF0 154 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 ANKRD61A6NGH8 418 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 PLPP3O14495 311 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 MAGEB3O15480 346 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 GRPRP30550 384 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 NAA10P41227 235 aaPredicted RBP13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 E2F1Q01094 437 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 EGR3Q06889 387 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 SLC3A1Q07837 685 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 GXYLT1Q4G148 440 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 ACSM3Q53FZ2 586 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 MESTQ5EB52 335 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 DCAF12Q5T6F0 453 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 HBMQ6B0K9 141 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 OPN5Q6U736 354 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 FAM220AQ7Z4H9 259 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 POC5Q8NA72 575 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 RHBDD1Q8TEB9 315 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 GHSRQ92847 366 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 SLC25A36Q96CQ1 311 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 SPACA9Q96E40 222 aaPredicted RBP13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 PELI1Q96FA3 418 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 DIRAS2Q96HU8 199 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 IMMP1LQ96LU5 166 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 ADAD1Q96M93 576 aaKnown RBP13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 ATF6BQ99941 703 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 ULBP3Q9BZM4 244 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 STRADBQ9C0K7 418 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 METTL7AQ9H8H3 244 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 FANCFQ9NPI8 374 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 VSX1Q9NZR4 365 aaPredicted RBP13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 WIF1Q9Y5W5 379 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 TRIOO75962 3097 aa13.36□□□□□ -0.27
ECHDC1-220ENST00000528402 IGHV1-45A0A0A0MS14 117 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 E9PI62 339 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 ARHGEF9O43307 516 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 FZD7O75084 574 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 ICAM2P13598 275 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 ADH6P28332 368 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 GTF2E2P29084 291 aaKnown RBP13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 CRABP1P29762 137 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 ACVR1BP36896 505 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 EIF1P41567 113 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms