RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	LINC00470	Q9BZP3	86 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	CXorf56	Q9H5V9	222 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	ZNF701	Q9NV72	531 aa	Predicted RBP	10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	MRPL39	Q9NYK5	338 aa	Known RBP	10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	SLC7A7	Q9UM01	511 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	LAMP3	Q9UQV4	416 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	AMDHD2	Q9Y303	409 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362		M0R1B8	84 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	OVOL3	O00110	214 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	PLPP3	O14495	311 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	ARHGEF9	O43307	516 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	MT-ATP6	P00846	226 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	NQO1	P15559	274 aa	Known RBP	10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	PTAFR	P25105	342 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	KDELR2	P33947	212 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	PRPS1	P60891	318 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	RPS4X	P62701	263 aa	Known RBP	10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	IL1RL1	Q01638	556 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	ROR2	Q01974	943 aa	Known RBP	10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	PUDP	Q08623	228 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	PMS2P3	Q13401	168 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	ZNF74	Q16587	644 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	TBRG1	Q3YBR2	411 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	LRRC23	Q53EV4	343 aa	Predicted RBP	10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	C8orf82	Q6P1X6	216 aa	Predicted RBP	10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	KLHL17	Q6TDP4	642 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	PRSS57	Q6UWY2	283 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	ARPIN	Q7Z6K5	226 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	YTHDF3	Q7Z739	585 aa	Known RBP	10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	WDFY1	Q8IWB7	410 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	UEVLD	Q8IX04	471 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	MICU2	Q8IYU8	434 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	TMEM123	Q8N131	208 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	C10orf53	Q8N6V4	93 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	BCL2L2	Q92843	193 aa	Predicted RBP	10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	MPP4	Q96JB8	637 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	PRSS27	Q9BQR3	290 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	NELFA	Q9H3P2	528 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	BAG5	Q9UL15	447 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	SH3GLB1	Q9Y371	365 aa		10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	MAGED1	Q9Y5V3	778 aa	Predicted RBP	10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	FLNA	P21333	2647 aa	Known RBP	10.29	□□□□□ -0.76
PSMC3-205	ENST00000528362	ELOVL7	A1L3X0	281 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	RPL36A-HNRNPH2	H7BZ11	118 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	KPNA4	O00629	521 aa	Predicted RBP	10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	SHOX2	O60902	331 aa	Predicted RBP	10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	SLC43A1	O75387	559 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	IFNA14	P01570	189 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	DRD4	P21917	467 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	SLC7A2	P52569	658 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	POU3F1	Q03052	451 aa	Predicted RBP	10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	KRTAP21-3	Q3LHN1	58 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	CYBRD1	Q53TN4	286 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	C1QTNF12	Q5T7M4	302 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	HMBOX1	Q6NT76	420 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	SLC22A25	Q6T423	547 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	KLHL24	Q6TFL4	600 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	B3GLCT	Q6Y288	498 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	DEF8	Q6ZN54	512 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	DTX2	Q86UW9	622 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	SLC15A3	Q8IY34	581 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	OR5J2	Q8NH18	312 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	ZNF837	Q96EG3	531 aa	Predicted RBP	10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	TXNDC15	Q96J42	360 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	RADIL	Q96JH8	1075 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362		Q96MF0	132 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	SLC19A3	Q9BZV2	496 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	FAM107B	Q9H098	131 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	MYLK2	Q9H1R3	596 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	OBP2B	Q9NPH6	170 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	MED29	Q9NX70	200 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	CISD1	Q9NZ45	108 aa	Known RBP	10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	MGAT4B	Q9UQ53	548 aa		10.28	□□□□□ -0.76
PSMC3-205	ENST00000528362	RAI1	Q7Z5J4	1906 aa	Predicted RBP	10.27	□□□□□ -0.76
PSMC3-205	ENST00000528362		A0A096LPE4	126 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	ARPC4-TTLL3	A0A0A6YYG9	625 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362		A0A1W2PPZ6	126 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362		E7EQL1	145 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	NME4	O00746	187 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	AKAP8	O43823	692 aa	Known RBP	10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	SNX3	O60493	162 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	OR5F1	O95221	314 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	CH25H	O95992	272 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	WNT11	O96014	354 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	CD8A	P01732	235 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	FOSL1	P15407	271 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	AHCY	P23526	432 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	LSP1	P33241	339 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	OR1E2	P47887	323 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	GYS2	P54840	703 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	SH3BGR	P55822	239 aa	Predicted RBP	10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	ARF1	P84077	181 aa	Known RBP	10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	LIPE	Q05469	1076 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	PHYHD1	Q5SRE7	291 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	CARD17	Q5XLA6	110 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	ANKRD16	Q6P6B7	361 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	TTC33	Q6PID6	262 aa	Predicted RBP	10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	HACD2	Q6Y1H2	254 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	SLC46A3	Q7Z3Q1	461 aa		10.27	□□□□□ -0.77
PSMC3-205	ENST00000528362	PXK	Q7Z7A4	578 aa		10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms