RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SH3BGRL2Q9UJC5 107 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 NCOR1O75376 2440 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 CD3GP09693 182 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 NAGAP17050 411 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 ANKRD34AQ69YU3 496 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 OR5D14Q8NGL3 314 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 TCEAL3Q969E4 200 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 ARHGDIGQ99819 225 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 CALHM2Q9HA72 323 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 CMC2Q9NRP2 79 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 MGAMO43451 1857 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 EP300Q09472 2414 aaPredicted RBP13.78□□□□□ -0.2
USP47-207ENST00000527733 H3BUI4 141 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 PITPNBP48739 271 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 SQSTM1Q13501 440 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 SF3A2Q15428 464 aaKnown RBP13.78□□□□□ -0.2
USP47-207ENST00000527733 HES3Q5TGS1 186 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 ANKRD37Q7Z713 158 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 PM20D2Q8IYS1 436 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 DTX3Q8N9I9 347 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 TRMT10AQ8TBZ6 339 aaKnown RBP13.78□□□□□ -0.2
USP47-207ENST00000527733 CPT1CQ8TCG5 803 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 BORCS8Q96FH0 119 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 C7orf34Q96L11 122 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 HCAR1Q9BXC0 346 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 GPR55Q9Y2T6 319 aaPredicted RBP13.78□□□□□ -0.2
USP47-207ENST00000527733 ZNF281Q9Y2X9 895 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 PDGFBP01127 241 aaPredicted RBP13.78□□□□□ -0.2
USP47-207ENST00000527733 IGFBP1P08833 259 aaPredicted RBP13.78□□□□□ -0.2
USP47-207ENST00000527733 IFNGR1P15260 489 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 RSU1Q15404 277 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 CCDC92Q53HC0 331 aaPredicted RBP13.78□□□□□ -0.2
USP47-207ENST00000527733 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.78□□□□□ -0.2
USP47-207ENST00000527733 OR52I1Q8NGK6 324 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 ISPDA4D126 451 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 PNLIPP16233 465 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 RAB3AP20336 220 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 PRKCDQ05655 676 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 AWAT2Q6E213 333 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 BRIX1Q8TDN6 353 aaKnown RBP13.78□□□□□ -0.2
USP47-207ENST00000527733 LMF1Q96S06 567 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 TEAD3Q99594 435 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 C14orf119Q9NWQ9 140 aa13.78□□□□□ -0.2
USP47-207ENST00000527733 NUFIP1Q9UHK0 495 aaKnown RBP13.78□□□□□ -0.2
USP47-207ENST00000527733 GTF2F2P13984 249 aa13.77□□□□□ -0.2
USP47-207ENST00000527733 MAP2K6P52564 334 aa13.77□□□□□ -0.2
USP47-207ENST00000527733 PPP5CP53041 499 aa13.77□□□□□ -0.2
USP47-207ENST00000527733 ARL6IP1Q15041 203 aa13.77□□□□□ -0.2
USP47-207ENST00000527733 ZNF181Q2M3W8 571 aa13.77□□□□□ -0.2
USP47-207ENST00000527733 LRRC18Q8N456 261 aa13.77□□□□□ -0.2
USP47-207ENST00000527733 SLC25A44Q96H78 314 aaPredicted RBP13.77□□□□□ -0.2
USP47-207ENST00000527733 FCRL1Q96LA6 429 aa13.77□□□□□ -0.2
USP47-207ENST00000527733 OCIAD1Q9NX40 245 aa13.77□□□□□ -0.2
USP47-207ENST00000527733 TAS2R16Q9NYV7 291 aa13.77□□□□□ -0.2
USP47-207ENST00000527733 SPEF1Q9Y4P9 236 aa13.77□□□□□ -0.2
USP47-207ENST00000527733 GVINP1Q7Z2Y8 2422 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 hCG_1807616A0A1W2PRN6 198 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 CBX7O95931 251 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 GABRA5P31644 462 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 LSSP48449 732 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 CSRP3P50461 194 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 TMED4Q7Z7H5 227 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 LOXL4Q96JB6 756 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 SLC25A18Q9H1K4 315 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 NIPAL2Q9H841 368 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 HINT3Q9NQE9 182 aaKnown RBP13.77□□□□□ -0.21
USP47-207ENST00000527733 KLK4Q9Y5K2 254 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 ANK1P16157 1881 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 CNOT1A5YKK6 2376 aaKnown RBP13.77□□□□□ -0.21
USP47-207ENST00000527733 A0A087WZY1 265 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 CBR3O75828 277 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 CT62P0C5K7 136 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 LINC00271P0C7V0 271 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 CCL4P13236 92 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 VAMP1P23763 118 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 HSF1Q00613 529 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 SLC10A1Q14973 349 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 ABCG5Q9H222 651 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 NTN4Q9HB63 628 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 RABL2AQ9UBK7 228 aaPredicted RBP13.77□□□□□ -0.21
USP47-207ENST00000527733 RABL2BQ9UNT1 228 aa13.77□□□□□ -0.21
USP47-207ENST00000527733 IGHV5-10-1A0A0J9YXX1 117 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 A0A1W2PNR3 127 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 OR6C70A6NIJ9 312 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 TPOP07202 933 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 GCH1P30793 250 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 HTR5AP47898 357 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 EMC4Q5J8M3 183 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 ARIH2OSQ8N7S6 290 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 ZNF565Q8N9K5 539 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 OR52N1Q8NH53 320 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 NPRL2Q8WTW4 380 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 LRFN5Q96NI6 719 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 POTEKPQ9BYX7 375 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 ZNF701Q9NV72 531 aaPredicted RBP13.76□□□□□ -0.21
USP47-207ENST00000527733 A4GNTQ9UNA3 340 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 IL1AP01583 271 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 SCG5P05408 212 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 IL32P24001 234 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 SDHAP31040 664 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms