RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 HSPB2A8KAH6 182 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 INMT-MINDY4F8WBC2 141 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 SERPINI2O75830 405 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 GSTT2P0CG29 244 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 GSTT2BP0CG30 244 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 FOLR1P15328 257 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 PSMB10P40306 273 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 NR0B1P51843 470 aaKnown RBP13.94□□□□□ -0.18
USH1C-207ENST00000527720 MRPS15P82914 257 aaKnown RBP13.94□□□□□ -0.18
USH1C-207ENST00000527720 SF3B4Q15427 424 aaKnown RBP eCLIP13.94□□□□□ -0.18
USH1C-207ENST00000527720 HSPB2Q16082 182 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 PLA1AQ53H76 456 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 VWA2Q5GFL6 755 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 ARHGAP40Q5TG30 622 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 NOXA1Q86UR1 476 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 CDC20BQ86Y33 519 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 PLPP5Q8NEB5 264 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 OR5H6Q8NGV6 325 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 ADAMTS14Q8WXS8 1223 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 TSPAN32Q96QS1 320 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 MRI1Q9BV20 369 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 ABCG5Q9H222 651 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 WNT16Q9UBV4 365 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 CAMK2AQ9UQM7 478 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 RBMX2Q9Y388 322 aaKnown RBP13.94□□□□□ -0.18
USH1C-207ENST00000527720 CACNG2Q9Y698 323 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 TRIOO75962 3097 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 A8MV72 311 aaPredicted RBP13.94□□□□□ -0.18
USH1C-207ENST00000527720 CTDSPLO15194 276 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 BCAT2O15382 392 aaPredicted RBP13.94□□□□□ -0.18
USH1C-207ENST00000527720 EEF1E1O43324 174 aaKnown RBP13.94□□□□□ -0.18
USH1C-207ENST00000527720 LANCL1O43813 399 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 MT-ATP6P00846 226 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 BGLAPP02818 100 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 F13BP05160 661 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 TFPIP10646 304 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 CSF2RBP32927 897 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 EFNA3P52797 238 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 CBFBQ13951 182 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 MESTQ5EB52 335 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 UBE2NLQ5JXB2 153 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 TMEM53Q6P2H8 277 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 LYPD4Q6UWN0 246 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 GLCCI1Q86VQ1 547 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 LIX1LQ8IVB5 337 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 ZNF441Q8N8Z8 693 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 ZNF511Q8NB15 262 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 ZNF524Q96C55 264 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 OMA1Q96E52 524 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 RNF170Q96K19 258 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 ADAD1Q96M93 576 aaKnown RBP13.94□□□□□ -0.18
USH1C-207ENST00000527720 TRAF4Q9BUZ4 470 aaPredicted RBP13.94□□□□□ -0.18
USH1C-207ENST00000527720 TBL1XR1Q9BZK7 514 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 NOX4Q9NPH5 578 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 PCNX3Q9H6A9 2034 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 A0A1B0GVT2 93 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 A0A1W2PPK0 400 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 PHYHO14832 338 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 ITGA10O75578 1167 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 SNRPBP14678 240 aaKnown RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 ARSBP15848 533 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 MAPK3P27361 379 aaPredicted RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 RAB25P57735 213 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 CDK10Q15131 360 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 RNF166Q96A37 237 aaPredicted RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 ZNF501Q96CX3 271 aaPredicted RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 DMRTB1Q96MA1 342 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 DPYSL5Q9BPU6 564 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 C7orf50Q9BRJ6 194 aaKnown RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 RTN4RQ9BZR6 473 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 VN1R1Q9GZP7 353 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 CCDC86Q9H6F5 360 aaKnown RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 AK6Q9Y3D8 172 aaKnown RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 TMEM14AQ9Y6G1 99 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 ASXL3Q9C0F0 2248 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 CPAMD8Q8IZJ3 1885 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 GSTZ1O43708 216 aaPredicted RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 GP1BBP13224 206 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 ITPKBP27987 946 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 ABCD3P28288 659 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 NANOS3P60323 173 aaKnown RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 CCDC85BQ15834 202 aaPredicted RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 SLC36A2Q495M3 483 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 WDR45BQ5MNZ6 344 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 PRAMEF17Q5VTA0 474 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 EEF1A1P5Q5VTE0 462 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 ASB18Q6ZVZ8 466 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 MAMDC2Q7Z304 686 aaPredicted RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 MARCH3Q86UD3 253 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 SLC25A45Q8N413 288 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 Q8N9G6 341 aaPredicted RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 TSSK2Q96PF2 358 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 DERL3Q96Q80 235 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 FYTTD1Q96QD9 318 aaKnown RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 NRSN2Q9GZP1 204 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 ZNF768Q9H5H4 540 aaKnown RBP13.93□□□□□ -0.18
USH1C-207ENST00000527720 MKL2Q9ULH7 1088 aa13.93□□□□□ -0.18
USH1C-207ENST00000527720 PCDHGA9Q9Y5G4 932 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms