RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 BCHEP06276 602 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 SFTPBP07988 381 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 ANKRD34CP0C6C1 535 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 ACRP10323 421 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 OSMP13725 252 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 ETFAP13804 333 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 FDXRP22570 491 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 PPIBP23284 216 aaKnown RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 S100A3P33764 101 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 DLSTP36957 453 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 IFNGR2P38484 337 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 RBM34P42696 430 aaKnown RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 ZNF84P51523 738 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 HMGA2P52926 109 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 PGGT1BP53609 377 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 RABGGTBP53611 331 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 DVL1P1P54792 670 aaPredicted RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 MAXP61244 160 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 WDR5P61964 334 aaKnown RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 DGCR2P98153 550 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 SLC6A3Q01959 620 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 PRKCZQ05513 592 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 ARHGAP1Q07960 439 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 MTAPQ13126 283 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 GTF2H2Q13888 395 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 RAB35Q15286 201 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 TEAD2Q15562 447 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 MAPK14Q16539 360 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 SLC5A12Q1EHB4 618 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 ZNF699Q32M78 642 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 RFTN2Q52LD8 501 aaPredicted RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 IFI44LQ53G44 452 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 AWAT1Q58HT5 328 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 VWA2Q5GFL6 755 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 MFSD14BQ5SR56 506 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 PRAMEF8Q5VWM4 474 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 PRAMEF7Q5VXH5 474 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 C18orf63Q68DL7 685 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 KIAA1211LQ6NV74 962 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 GTF2H2CQ6P1K8 395 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 TMIGD1Q6UXZ0 262 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 SLC39A5Q6ZMH5 540 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 C1orf122Q6ZSJ8 110 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 Q6ZSR9 355 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 CXXC5Q7LFL8 322 aaKnown RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 GPRIN1Q7Z2K8 1008 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 TIPARPQ7Z3E1 657 aaKnown RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 VTCN1Q7Z7D3 282 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 LDB1Q86U70 411 aaPredicted RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 SLC30A8Q8IWU4 369 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 C4orf19Q8IY42 314 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 COMMD1Q8N668 190 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 POGLUT1Q8NBL1 392 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 SLC30A7Q8NEW0 376 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 OR2AP1Q8NGE2 309 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 OR2A12Q8NGT7 310 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 NUBPLQ8TB37 319 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 FAM151AQ8WW52 585 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 EXT2Q93063 718 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 NT5C3BQ969T7 300 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 NUDT11Q96G61 164 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 PLPPR2Q96GM1 343 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 C12orf42Q96LP6 360 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 P2RX7Q99572 595 aaKnown RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 TBL1YQ9BQ87 522 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 SULT4A1Q9BR01 284 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 POLR3FQ9H1D9 316 aaPredicted RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 ATG5Q9H1Y0 275 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 MTIF3Q9H2K0 278 aaKnown RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 RGCCQ9H4X1 137 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 FN3KRPQ9HA64 309 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 LPAR2Q9HBW0 351 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 SEMA4BQ9NPR2 832 aaPredicted RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 TREX1Q9NSU2 369 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 DNAJC27Q9NZQ0 273 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 COMMD9Q9P000 198 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 LRFN1Q9P244 771 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 MYOTQ9UBF9 498 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 TESQ9UGI8 421 aaKnown RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 SERGEFQ9UGK8 458 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 SUSD2Q9UGT4 822 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 IL19Q9UHD0 177 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 PCTPQ9UKL6 214 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 FZD4Q9ULV1 537 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 ST3GAL5Q9UNP4 418 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 FLVCR2Q9UPI3 526 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 ICKQ9UPZ9 632 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 YARS2Q9Y2Z4 477 aaKnown RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 RAI2Q9Y5P3 530 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 WIF1Q9Y5W5 379 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 YLPM1P49750 1951 aaKnown RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 SBF1O95248 1867 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 LTBP3Q9NS15 1303 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 F5H0A9 414 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 GABARAPH6UMI1 98 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 M0R129 80 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 NUDT21O43809 227 aaKnown RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 LEFTY1O75610 366 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 CLDN9O95484 217 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 IFNA21P01568 189 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms