RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ITGADQ13349 1161 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 TBR1Q16650 682 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 NIPAL3Q6P499 406 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 SLC37A3Q8NCC5 494 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 SNRNP27Q8WVK2 155 aaKnown RBP16.94■□□□□ 0.3
SMPD1-203ENST00000527275 ERMAPQ96PL5 475 aaPredicted RBP16.94■□□□□ 0.3
SMPD1-203ENST00000527275 HCAR1Q9BXC0 346 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 DCSTAMPQ9H295 470 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 ZFP64Q9NPA5 681 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.93■□□□□ 0.3
SMPD1-203ENST00000527275 IGF2P01344 180 aa16.93■□□□□ 0.3
SMPD1-203ENST00000527275 PDGFAP04085 211 aa16.93■□□□□ 0.3
SMPD1-203ENST00000527275 LIMS3P0CW19 117 aa16.93■□□□□ 0.3
SMPD1-203ENST00000527275 LIMS4P0CW20 117 aa16.93■□□□□ 0.3
SMPD1-203ENST00000527275 DPP4P27487 766 aa16.93■□□□□ 0.3
SMPD1-203ENST00000527275 WNT4P56705 351 aa16.93■□□□□ 0.3
SMPD1-203ENST00000527275 DCTN2Q13561 401 aaKnown RBP16.93■□□□□ 0.3
SMPD1-203ENST00000527275 TIMM50Q3ZCQ8 353 aa16.93■□□□□ 0.3
SMPD1-203ENST00000527275 IGFL3Q6UXB1 125 aa16.93■□□□□ 0.3
SMPD1-203ENST00000527275 SCMH1Q96GD3 660 aa16.93■□□□□ 0.3
SMPD1-203ENST00000527275 C12orf10Q9HB07 376 aa16.93■□□□□ 0.3
SMPD1-203ENST00000527275 BOKQ9UMX3 212 aaPredicted RBP16.93■□□□□ 0.3
SMPD1-203ENST00000527275 PRRC2CQ9Y520 2896 aaKnown RBP16.93■□□□□ 0.3
SMPD1-203ENST00000527275 ACACBO00763 2458 aa16.93■□□□□ 0.3
SMPD1-203ENST00000527275 MKRN2OSH3BPM6 223 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 KLRC4-KLRK1H3BQV0 150 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 K7EM74 188 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 ZNF3P17036 446 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 TUBA1BP68363 451 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 FOXF1Q12946 379 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 KLHL12Q53G59 568 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 SOWAHCQ53LP3 525 aaPredicted RBP16.92■□□□□ 0.3
SMPD1-203ENST00000527275 OR2G6Q5TZ20 316 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 ARHGAP11AQ6P4F7 1023 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 USP43Q70EL4 1123 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 TUBA1AQ71U36 451 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 ADCK1Q86TW2 530 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 LHFPL3Q86UP9 236 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 ADGRG3Q86Y34 549 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 OR5M1Q8NGP8 315 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 CENPOQ9BU64 300 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 TNFRSF10DQ9UBN6 386 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 CHRNA9Q9UGM1 479 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 NCKAP5O14513 1909 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 MAP1BP46821 2468 aaKnown RBP16.92■□□□□ 0.3
SMPD1-203ENST00000527275 MCIDASD6RGH6 385 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 ETV2O00321 342 aaPredicted RBP16.92■□□□□ 0.3
SMPD1-203ENST00000527275 IFNGP01579 166 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 PAICSP22234 425 aaKnown RBP16.92■□□□□ 0.3
SMPD1-203ENST00000527275 CXCR1P25024 350 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 SERPINB10P48595 397 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 POLR2HP52434 150 aaKnown RBP16.92■□□□□ 0.3
SMPD1-203ENST00000527275 DSCR4P56555 118 aaPredicted RBP16.92■□□□□ 0.3
SMPD1-203ENST00000527275 RPS3AP61247 264 aaKnown RBP16.92■□□□□ 0.3
SMPD1-203ENST00000527275 EGR4Q05215 589 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.92■□□□□ 0.3
SMPD1-203ENST00000527275 CRMP1Q14194 572 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 TOMM20Q15388 145 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 B3GLCTQ6Y288 498 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 IGFN1Q86VF2 1251 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 C10orf53Q8N6V4 93 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 TMEM178AQ8NBL3 297 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 OR51G2Q8NGK0 314 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 GATAD2BQ8WXI9 593 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 TM9SF4Q92544 642 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 ABHD17AQ96GS6 310 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 RNF167Q9H6Y7 350 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 RPH3AQ9Y2J0 694 aaPredicted RBP16.92■□□□□ 0.3
SMPD1-203ENST00000527275 IER3IP1Q9Y5U9 82 aa16.92■□□□□ 0.3
SMPD1-203ENST00000527275 ZIC3O60481 467 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 INHBBP09529 407 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 RPL4P36578 427 aaKnown RBP16.91■□□□□ 0.3
SMPD1-203ENST00000527275 ZNF74Q16587 644 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 DPY19L2P2Q6ZN68 376 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 ZADH2Q8N4Q0 377 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 CYB561A3Q8NBI2 242 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 OR9Q1Q8NGQ5 310 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 POC1BQ8TC44 478 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 LIPHQ8WWY8 451 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 MRGPRX4Q96LA9 322 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 TEAD3Q99594 435 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 OR51V1Q9H2C8 321 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 PLGRKTQ9HBL7 147 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 TMED7-TICAM2A0A0A6YYA0 188 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 ZC3H12DA2A288 527 aaKnown RBP16.91■□□□□ 0.3
SMPD1-203ENST00000527275 IGHA1P01876 353 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 HTR3AP46098 478 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 MEOX1P50221 254 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 DLX5P56178 289 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 PRPS1P60891 318 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 SLC25A53Q5H9E4 307 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.91■□□□□ 0.3
SMPD1-203ENST00000527275 OR52E2Q8NGJ4 325 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 RELTQ969Z4 430 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 TTTY12Q9BZ98 90 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 NANSQ9NR45 359 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 DKKL1Q9UK85 242 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 TMED7Q9Y3B3 224 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 PMF1-BGLAPU3KQ54 211 aa16.91■□□□□ 0.3
SMPD1-203ENST00000527275 BSNQ9UPA5 3926 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms