RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 RANBP3LQ86VV4 465 aaPredicted RBP9.65□□□□□ -0.86
NEDD8-204ENST00000526430 AQP12AQ8IXF9 295 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 GCNT2Q8N0V5 402 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 PAPD5Q8NDF8 572 aaKnown RBP9.65□□□□□ -0.86
NEDD8-204ENST00000526430 OR10D3Q8NH80 312 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 OR2V1Q8NHB1 315 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 CANT1Q8WVQ1 401 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 GEMIN6Q8WXD5 167 aaKnown RBP9.65□□□□□ -0.86
NEDD8-204ENST00000526430 LZICQ8WZA0 190 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 TAAR8Q969N4 342 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 SLC47A1Q96FL8 570 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 SLC41A3Q96GZ6 507 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 TNFRSF13CQ96RJ3 184 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 SEPHS2Q99611 448 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 CACYBPQ9HB71 228 aaKnown RBP9.65□□□□□ -0.86
NEDD8-204ENST00000526430 SLC7A7Q9UM01 511 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 A8MVM7 634 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 LRRN3E7EW58 273 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 EIF1AYO14602 144 aaKnown RBP9.64□□□□□ -0.87
NEDD8-204ENST00000526430 SEC14L5O43304 696 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 KLF4O43474 513 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 BGLAPP02818 100 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 MT-ND1P03886 318 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 IFNW1P05000 195 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 PTNP21246 168 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 ENPP1P22413 925 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 CXCR1P25024 350 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 NTF4P34130 210 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 CLK1P49759 484 aaKnown RBP9.64□□□□□ -0.87
NEDD8-204ENST00000526430 DIO1P49895 249 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 ERFP50548 548 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 MAP2K6P52564 334 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 HMGA2P52926 109 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 UGT2B15P54855 530 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 COPZ1P61923 177 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 FHL1Q13642 323 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 GUSBP1Q15486 140 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 ZSCAN26Q16670 478 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 MTX3Q5HYI7 312 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 SWT1Q5T5J6 900 aaKnown RBP9.64□□□□□ -0.87
NEDD8-204ENST00000526430 ADAM5Q6NVV9 412 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 C3orf33Q6P1S2 294 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 TBPL2Q6SJ96 375 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 STK35Q8TDR2 534 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 TMEM255BQ8WV15 326 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 DTNBP1Q96EV8 351 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 DUS3LQ96G46 650 aaKnown RBP9.64□□□□□ -0.87
NEDD8-204ENST00000526430 PRRC1Q96M27 445 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 NMNAT1Q9HAN9 279 aaPredicted RBP9.64□□□□□ -0.87
NEDD8-204ENST00000526430 BARX1Q9HBU1 254 aaPredicted RBP9.64□□□□□ -0.87
NEDD8-204ENST00000526430 C20orf141Q9NUB4 165 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 VNN3Q9NY84 501 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 SLC13A4Q9UKG4 626 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 TRAPPC4Q9Y296 219 aa9.64□□□□□ -0.87
NEDD8-204ENST00000526430 A0A087WUU8 490 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 LIPT2A6NK58 231 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 ANKRD65E5RJM6 399 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 SMAD9O15198 467 aaKnown RBP9.63□□□□□ -0.87
NEDD8-204ENST00000526430 PMS2P2O95744 297 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 IGHV4-39P01824 125 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 DANCRP0C864 163 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 THRBP10828 461 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 PNMTP11086 282 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 POU2F1P14859 743 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 UQCRBP14927 111 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 PPP3CBP16298 524 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 RHCEP18577 417 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 CARD18P57730 90 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 RAC3P60763 192 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 LOXL1Q08397 574 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-204ENST00000526430 FLOT2Q14254 428 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 SEC23BQ15437 767 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 ZNF239Q16600 458 aaKnown RBP9.63□□□□□ -0.87
NEDD8-204ENST00000526430 C1orf140Q5VVS0 124 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 HBMQ6B0K9 141 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 ZNF474Q6S9Z5 364 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-204ENST00000526430 C22orf34Q6ZV56 151 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 OFCC1Q8IZS5 231 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 RFLNBQ8N5W9 214 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 OR4C15Q8NGM1 316 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 FNDC9Q8TBE3 224 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 SLC7A13Q8TCU3 470 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 SLC25A43Q8WUT9 341 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-204ENST00000526430 GTPBP3Q969Y2 492 aaKnown RBP9.63□□□□□ -0.87
NEDD8-204ENST00000526430 MCUR1Q96AQ8 359 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 STARD4Q96DR4 205 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 ZC3HAV1LQ96H79 300 aaKnown RBP9.63□□□□□ -0.87
NEDD8-204ENST00000526430 MOGAT1Q96PD6 335 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 OR5B2Q96R09 309 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 RHNO1Q9BSD3 238 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 TMEM43Q9BTV4 400 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 POLR2J2Q9GZM3 115 aaKnown RBP9.63□□□□□ -0.87
NEDD8-204ENST00000526430 POLR2J3Q9H1A7 115 aaKnown RBP9.63□□□□□ -0.87
NEDD8-204ENST00000526430 MAGIXQ9H6Y5 334 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 RNF122Q9H9V4 155 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 SERINC1Q9NRX5 453 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 SEC14L4Q9UDX3 406 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 HDGFL3Q9Y3E1 203 aa9.63□□□□□ -0.87
NEDD8-204ENST00000526430 TRBV4-1A0A0J9YWV2 114 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 A0A1W2PRQ8 180 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms