RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CTDNEP1O95476 244 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 GNA14O95837 355 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 TSPAN12O95859 305 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 F10P00742 488 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 IGF1P05019 195 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 KLK3P07288 261 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 ZCCHC18P0CG32 403 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 TROVE2P10155 538 aaKnown RBP eCLIP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 MUC1P15941 1255 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 EIF2S2P20042 333 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 COX5AP20674 150 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 LAP3P28838 519 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CALCRP30988 508 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 SHMT2P34897 504 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 HSD17B2P37059 387 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 NUP62P37198 522 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 BDKRB1P46663 353 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CRYBB1P53674 252 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 ACTR1AP61163 376 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 SELENOTP62341 195 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 RPL23AP62750 156 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CSNK1G2P78368 415 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 ZMYND11Q15326 602 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 ANGPT1Q15389 498 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 PPP1R7Q15435 360 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 SLC15A2Q16348 729 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 MICBQ29980 383 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 PARP15Q460N3 678 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CCDC152Q4G0S7 254 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 DMRTC1Q5HYR2 192 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 TPGS2Q68CL5 300 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CENPPQ6IPU0 288 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 C11orf71Q6IPW1 123 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 C16orf87Q6PH81 154 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 KDELC1Q6UW63 502 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 Q6ZN92 141 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 LRRC74BQ6ZQY2 392 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 EFL1Q7Z2Z2 1120 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 NEGR1Q7Z3B1 354 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 C6orf120Q7Z4R8 191 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CTAGE6Q86UF2 777 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 GRAMD2AQ8IUY3 354 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 LRRC75A-AS1Q8N1F1 130 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 FAM184AQ8NB25 1140 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 BHLHE23Q8NDY6 225 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 IPMKQ8NFU5 416 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 OR51S1Q8NGJ8 323 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 OR51G2Q8NGK0 314 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 OR5L2Q8NGL0 311 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 OR4D5Q8NGN0 318 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 OR13C2Q8NGS9 318 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 OR1F12Q8NHA8 337 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 M1APQ8TC57 530 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 GIMAP1Q8WWP7 306 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 SHC3Q92529 594 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 OSTF1Q92882 214 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 RPL3LQ92901 407 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 EMG1Q92979 244 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CXorf40BQ96DE9 158 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 COQ2Q96H96 371 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 TPD52L3Q96J77 140 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 TESK2Q96S53 571 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 SLC6A7Q99884 636 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 GAL3ST1Q99999 423 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 KCTD14Q9BQ13 255 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 ECSITQ9BQ95 431 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 ERP44Q9BS26 406 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 TMEM43Q9BTV4 400 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 EDEM2Q9BV94 578 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CAPS2Q9BXY5 557 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 PARD6BQ9BYG5 372 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 SPNS1Q9H2V7 528 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 LRRN3Q9H3W5 708 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 RBKSQ9H477 322 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 REEP4Q9H6H4 257 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 SYNDIG1Q9H7V2 258 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 MEAF6Q9HAF1 191 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 SLC17A5Q9NRA2 495 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CHRAC1Q9NRG0 131 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 TREM2Q9NZC2 230 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 KCNIP1Q9NZI2 227 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 WRAP73Q9P2S5 460 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 XPO7Q9UIA9 1087 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 IKZF2Q9UKS7 526 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CDH9Q9ULB4 789 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 HPCAL4Q9UM19 191 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 USP16Q9Y5T5 823 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 COL27A1Q8IZC6 1860 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 MYO16Q9Y6X6 1858 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 SCN2AQ99250 2005 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CENPJQ9HC77 1338 aaPredicted RBP0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 FANCIQ9NVI1 1328 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 TRAV26-1A0A087WT03 109 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 IGHV1OR21-1A0A087WYE8 117 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 A0A0B4J2A0 478 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 LINC00854A0A1B0GVQ3 168 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 LRP5LA4QPB2 252 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 METTL21EPA6NDL7 271 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 FAM47DPA6NHR8 397 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 LRRIQ4A6NIV6 560 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms