RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 MED31Q9Y3C7 131 aa5.76□□□□□ -1.49
CD44-214ENST00000525211 DIDO1Q9BTC0 2240 aaKnown RBP5.76□□□□□ -1.49
CD44-214ENST00000525211 NCOA6Q14686 2063 aaPredicted RBP5.76□□□□□ -1.49
CD44-214ENST00000525211 PHF3Q92576 2039 aaKnown RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 MYO18BQ8IUG5 2567 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 ARHGAP21Q5T5U3 1957 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 INTS1Q8N201 2190 aaKnown RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 A0A1W2PNV4 684 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 SLC22A20A6NK97 555 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 EIF4E1BA6NMX2 242 aaKnown RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 EFCAB9A8MZ26 197 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 LINC01387J3KSC0 135 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 M0R129 80 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 PRRG2O14669 202 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 HNRNPRO43390 633 aaKnown RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 OR10H3O60404 316 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 ZG16O60844 167 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 SERPINI2O75830 405 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 CCNB2O95067 398 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 STAMBPO95630 424 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 BAG2O95816 211 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 PLGP00747 810 aaPredicted RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 CGAP01215 116 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 IGHV3-9P01782 118 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 UQCRBP14927 111 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 ITGA2P17301 1181 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 FASP25445 335 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 AGTR1P30556 359 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 DNAJA1P31689 397 aaKnown RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 CLK1P49759 484 aaKnown RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 SELENOPP49908 381 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 RPS4XP62701 263 aaKnown RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 ERVK-25P63136 954 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 SNTB1Q13884 538 aaKnown RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 TSC22D1Q15714 1073 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 SGCBQ16585 318 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 TMEM236Q5W0B7 351 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 OTPQ5XKR4 325 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 C1orf94Q6P1W5 598 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 FAHD1Q6P587 224 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 SHQ1Q6PI26 577 aaKnown RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 PAQR6Q6TCH4 344 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 B3GNT6Q6ZMB0 384 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 C22orf34Q6ZV56 151 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 TMPRSS11FQ6ZWK6 438 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 H1FNTQ75WM6 255 aaPredicted RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 GALNT5Q7Z7M9 940 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 PQLC1Q8N2U9 271 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 IQCF1Q8N6M8 205 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 ICA1LQ8NDH6 482 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 OR9K2Q8NGE7 335 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 OR4Q3Q8NH05 313 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 OR5J2Q8NH18 312 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 OR6S1Q8NH40 331 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 OR5K1Q8NHB7 308 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 PIGXQ8TBF5 258 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 GIPC3Q8TF64 312 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 LIPHQ8WWY8 451 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 HTRA1Q92743 480 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 STARD4Q96DR4 205 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 SAMD8Q96LT4 415 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 HS6ST2Q96MM7 605 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 EPYCQ99645 322 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 OPN3Q9H1Y3 402 aaPredicted RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 TP63Q9H3D4 680 aaPredicted RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 ANKRD19PQ9H560 264 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 REEP1Q9H902 201 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 CALHM2Q9HA72 323 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 HHATLQ9HCP6 504 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 MRPL39Q9NYK5 338 aaKnown RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 ZNF346Q9UL40 294 aaKnown RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 RNF6Q9Y252 685 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 SIGLEC7Q9Y286 467 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 RRP15Q9Y3B9 282 aaKnown RBP5.75□□□□□ -1.49
CD44-214ENST00000525211 ADAM18Q9Y3Q7 739 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 FLVCR1Q9Y5Y0 555 aa5.75□□□□□ -1.49
CD44-214ENST00000525211 IGKV3D-15A0A087WSY6 115 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 ELOA3CA0A087WX78 387 aaPredicted RBP5.74□□□□□ -1.49
CD44-214ENST00000525211 A0A096LPE4 126 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 A0A1W2PPZ6 126 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 CLEC18AA5D8T8 446 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 NKX2-6A6NCS4 301 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 UNC119BA6NIH7 251 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 E9PLN8 166 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 E9PQ18 207 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 BLOC1S5-TXNDC5H3BN57 136 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 H7C1C5 153 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 C19orf84I3L1E1 186 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 WDR1O75083 606 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 SS18L1O75177 396 aaPredicted RBP5.74□□□□□ -1.49
CD44-214ENST00000525211 RCBTB2O95199 551 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 SYNGR4O95473 234 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 SLC2A10O95528 541 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 ADORA3P0DMS8 318 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 TMIGD3P0DMS9 266 aaPredicted RBP5.74□□□□□ -1.49
CD44-214ENST00000525211 PEX2P28328 305 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 CLDN17P56750 224 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 RPS3AP61247 264 aaKnown RBP5.74□□□□□ -1.49
CD44-214ENST00000525211 LCN6P62502 163 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 SLC35A1P78382 337 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms