RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ZNF672Q499Z4 452 aaPredicted RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 SLC9C1Q4G0N8 1177 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 DDI2Q5TDH0 399 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 OR2G6Q5TZ20 316 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 FAHD1Q6P587 224 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 SHC4Q6S5L8 630 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 SPESP1Q6UW49 350 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 BTNL3Q6UXE8 466 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 Q6ZRM9 215 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 SLC25A48Q6ZT89 311 aaKnown RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 SSX7Q7RTT5 188 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 NUFIP2Q7Z417 695 aaKnown RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 SLC51BQ86UW2 128 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 GLCCI1Q86VQ1 547 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 ENTHD1Q8IYW4 607 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 Q8N402 240 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 C2orf73Q8N5S3 287 aaPredicted RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 OR5B17Q8NGF7 314 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 OR6K2Q8NGY2 324 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 LYPD6BQ8NI32 183 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 CNIH3Q8TBE1 160 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 SPPL2AQ8TCT8 520 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 PYDC1Q8WXC3 89 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 RORBQ92753 470 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 DLX4Q92988 240 aaPredicted RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 HGDQ93099 445 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.92□□□□□ -1.78
CD44-213ENST00000525209 CXorf40BQ96DE9 158 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 CCDC126Q96EE4 140 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 CENPNQ96H22 339 aaPredicted RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 ZNF641Q96N77 438 aaPredicted RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 GFM1Q96RP9 751 aaKnown RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 CGREF1Q99674 301 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 PRRT1Q99946 306 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 MICU1Q9BPX6 476 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 NEURL2Q9BR09 285 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 BEX2Q9BXY8 128 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 ZYG11BQ9C0D3 744 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 NAA50Q9GZZ1 169 aaKnown RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 PATZ1Q9HBE1 687 aaKnown RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 SLC25A19Q9HC21 320 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 DUS2Q9NX74 493 aaKnown RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 DKK2Q9UBU2 259 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 FBXL3Q9UKT7 428 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.92□□□□□ -1.78
CD44-213ENST00000525209 ZNF337Q9Y3M9 751 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 RAI2Q9Y5P3 530 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 MYH14Q7Z406 1995 aaKnown RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 DIP2AQ14689 1571 aa3.92□□□□□ -1.78
CD44-213ENST00000525209 FNDC1Q4ZHG4 1894 aaPredicted RBP3.92□□□□□ -1.78
CD44-213ENST00000525209 METP08581 1390 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 RAB3GAP2Q9H2M9 1393 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 PLCH1Q4KWH8 1693 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 TRBV5-5A0A0J9YX44 114 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 SLC5A10A0PJK1 596 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 PSMB11A5LHX3 300 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 A8MVM7 634 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 M0R036 132 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 ETV2O00321 342 aaPredicted RBP3.91□□□□□ -1.78
CD44-213ENST00000525209 DYNC1I1O14576 645 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 EPHB6O15197 1021 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 SLC16A4O15374 487 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 KIAA0513O60268 411 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 PEX10O60683 326 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 NDUFA10O95299 355 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 FGF19O95750 216 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 SYF2O95926 243 aaKnown RBP3.91□□□□□ -1.78
CD44-213ENST00000525209 UMODP07911 640 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 GNAO1P09471 354 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 M6PRP20645 277 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 OPRD1P41143 372 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 MAP3K8P41279 467 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 GRIA3P42263 894 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 RBM34P42696 430 aaKnown RBP3.91□□□□□ -1.78
CD44-213ENST00000525209 DAPK1P53355 1430 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 CRISP1P54107 249 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 VLDLRP98155 873 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 HOXA4Q00056 320 aaPredicted RBP3.91□□□□□ -1.78
CD44-213ENST00000525209 MYL7Q01449 175 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 PDIA2Q13087 525 aaKnown RBP3.91□□□□□ -1.78
CD44-213ENST00000525209 MAD2L1BPQ15013 274 aaPredicted RBP3.91□□□□□ -1.78
CD44-213ENST00000525209 ZNHIT3Q15649 155 aaPredicted RBP3.91□□□□□ -1.78
CD44-213ENST00000525209 HLFQ16534 295 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 C3AR1Q16581 482 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 ARHGAP31Q2M1Z3 1444 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 PPM1LQ5SGD2 360 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 WASHC2DQ5SRD0 308 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 TIMM23BQ5SRD1 257 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 OR4C11Q6IEV9 310 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 PNCKQ6P2M8 343 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 SLC25A47Q6Q0C1 308 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.91□□□□□ -1.78
CD44-213ENST00000525209 PGAP1Q75T13 922 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 COX15Q7KZN9 410 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 SSX6Q7RTT6 188 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 HIPK1Q86Z02 1210 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 APOBEC3FQ8IUX4 373 aaKnown RBP3.91□□□□□ -1.78
CD44-213ENST00000525209 ZFP82Q8N141 532 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 MS4A15Q8N5U1 240 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms