RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 Q6ZT83 130 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 PLCZ1Q86YW0 608 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 PQLC3Q8N755 202 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 GBP7Q8N8V2 638 aaPredicted RBP5.77□□□□□ -1.49
NEDD8-203ENST00000524927 NEXN-AS1Q8NBZ9 246 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 BBOF1Q8ND07 529 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 PPFIBP2Q8ND30 876 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 FAM110BQ8TC76 370 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 LKAAEAR1Q8TD35 194 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 RAB39BQ96DA2 213 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 CDRT15Q96T59 188 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 CSF3RQ99062 836 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 DDOQ99489 341 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 CCDC106Q9BWC9 280 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 CHIAQ9BZP6 476 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 PCBD2Q9H0N5 130 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 DDX47Q9H0S4 455 aaKnown RBP5.77□□□□□ -1.49
NEDD8-203ENST00000524927 TSPY26PQ9H489 355 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 RAD21L1Q9H4I0 556 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 RABEP2Q9H5N1 569 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 C16orf95Q9H693 158 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 ZNF665Q9H7R5 613 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 CCDC177Q9NQR7 707 aaPredicted RBP5.77□□□□□ -1.49
NEDD8-203ENST00000524927 ABCF3Q9NUQ8 709 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 FAM120CQ9NX05 1096 aaKnown RBP5.77□□□□□ -1.49
NEDD8-203ENST00000524927 PAQR5Q9NXK6 330 aaPredicted RBP5.77□□□□□ -1.49
NEDD8-203ENST00000524927 MCTS1Q9ULC4 181 aaKnown RBP5.77□□□□□ -1.49
NEDD8-203ENST00000524927 HEATR1Q9H583 2144 aaKnown RBP5.77□□□□□ -1.49
NEDD8-203ENST00000524927 LYNX1G3V0Z9 82 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 H0YL77 283 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 CLGNO14967 610 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 LYZL6O75951 148 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 LYNX1P0DP58 116 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 FERP16591 822 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 ACHEP22303 614 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 PTGDSP41222 190 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 CLDN20P56880 219 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 SEC61BP60468 96 aaKnown RBP5.76□□□□□ -1.49
NEDD8-203ENST00000524927 SLC25A11Q02978 314 aaKnown RBP5.76□□□□□ -1.49
NEDD8-203ENST00000524927 EGFEM1PQ0D2K5 195 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 RCN2Q14257 317 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 DECR1Q16698 335 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 C9orf152Q5JTZ5 239 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 PPP1R2P3Q6NXS1 205 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 SPATA19Q7Z5L4 167 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 GPR180Q86V85 440 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 CARM1Q86X55 608 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 RIBC1Q8N443 379 aaPredicted RBP5.76□□□□□ -1.49
NEDD8-203ENST00000524927 WFDC9Q8NEX5 89 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 RAPGEF5Q92565 580 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 DYRK2Q92630 601 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 CDKN2AIPNLQ96HQ2 116 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 MTERF1Q99551 399 aaKnown RBP5.76□□□□□ -1.49
NEDD8-203ENST00000524927 CHMP1AQ9HD42 196 aaPredicted RBP5.76□□□□□ -1.49
NEDD8-203ENST00000524927 NLE1Q9NVX2 485 aaPredicted RBP5.76□□□□□ -1.49
NEDD8-203ENST00000524927 RNF7Q9UBF6 113 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 FBXL2Q9UKC9 423 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 SLC25A15Q9Y619 301 aa5.76□□□□□ -1.49
NEDD8-203ENST00000524927 IQANK1A0A1B0GTG1 560 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 IQCF5A8MTL0 148 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 ATP6V1G2-DDX39BF2Z307 99 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 M0R1B8 84 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 UBE2CO00762 179 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 ANGPTL7O43827 346 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 AIFM1O95831 613 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 TOMM40O96008 361 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 SERPIND1P05546 499 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 PRSS2P07478 247 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 IGLL1P15814 213 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 ATP5DP30049 168 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 ARRB2P32121 409 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 APOBEC1P41238 236 aaKnown RBP5.75□□□□□ -1.49
NEDD8-203ENST00000524927 NDUFA8P51970 172 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 IRX6P78412 446 aaPredicted RBP5.75□□□□□ -1.49
NEDD8-203ENST00000524927 DHX34Q14147 1143 aaKnown RBP5.75□□□□□ -1.49
NEDD8-203ENST00000524927 PDK2Q15119 407 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 CASC4Q6P4E1 433 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 NUP54Q7Z3B4 507 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 KRT222Q8N1A0 295 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 TBC1D19Q8N5T2 526 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 ZSCAN4Q8NAM6 433 aaPredicted RBP5.75□□□□□ -1.49
NEDD8-203ENST00000524927 DEFB108BQ8NET1 73 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 OR2AK2Q8NG84 335 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 ADAMTS16Q8TE57 1224 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 NELFBQ8WX92 580 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 TAAR8Q969N4 342 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 PANX3Q96QZ0 392 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 KLRF1Q9NZS2 232 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 ZNF337Q9Y3M9 751 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 POMT1Q9Y6A1 747 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 SPACA6W5XKT8 324 aa5.75□□□□□ -1.49
NEDD8-203ENST00000524927 ALMS1Q8TCU4 4167 aa5.74□□□□□ -1.49
NEDD8-203ENST00000524927 C2orf92A0A1B0GVN3 265 aa5.74□□□□□ -1.49
NEDD8-203ENST00000524927 TRBC2A0A5B9 178 aa5.74□□□□□ -1.49
NEDD8-203ENST00000524927 KLF11O14901 512 aa5.74□□□□□ -1.49
NEDD8-203ENST00000524927 ANKRD28O15084 1053 aa5.74□□□□□ -1.49
NEDD8-203ENST00000524927 OR1F1O43749 312 aa5.74□□□□□ -1.49
NEDD8-203ENST00000524927 PSIP1O75475 530 aaKnown RBP5.74□□□□□ -1.49
NEDD8-203ENST00000524927 GAGE7O76087 117 aa5.74□□□□□ -1.49
NEDD8-203ENST00000524927 NTN1O95631 604 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms