RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, human

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BEST1-204	ENST00000524926	INIP	Q9NRY2	104 aa		13.82	□□□□□ -0.2
BEST1-204	ENST00000524926	CDX4	O14627	284 aa	Predicted RBP	13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	SULT1C4	O75897	302 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	REN	P00797	406 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	CD59	P13987	128 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	ACVR1B	P36896	505 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	ZNF41	P51814	821 aa	Predicted RBP	13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	CAV3	P56539	151 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	ACTA2	P62736	377 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	ACTG2	P63267	376 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	LINC01590	Q5TEZ4	76 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	TMEM91	Q6ZNR0	172 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926		Q6ZNX1	250 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	CENPS	Q8N2Z9	138 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	ABTB1	Q969K4	478 aa	Predicted RBP	13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	IMMP1L	Q96LU5	166 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	PISD	Q9UG56	409 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	PADI1	Q9ULC6	663 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	COPS3	Q9UNS2	423 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	GRIP1	Q9Y3R0	1128 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	HRH3	Q9Y5N1	445 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	WIF1	Q9Y5W5	379 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	ALPK2	Q86TB3	2170 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	SHISA8	B8ZZ34	492 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	XKRY	O14609	159 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	PLPP2	O43688	288 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	RGS9	O75916	674 aa	Predicted RBP	13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	TCEA1	P23193	301 aa	Known RBP	13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	PTGDS	P41222	190 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	APOBEC1	P41238	236 aa	Known RBP	13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	CASP3	P42574	277 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	RAB15	P59190	212 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	FOXF1	Q12946	379 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	INPP5J	Q15735	1006 aa	Predicted RBP	13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	C5orf46	Q6UWT4	87 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	IL20RB	Q6UXL0	311 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	ZNF417	Q8TAU3	575 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	RNF138	Q8WVD3	245 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	THAP4	Q8WY91	577 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	ARL5B	Q96KC2	179 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	ZNF587	Q96SQ5	575 aa	Predicted RBP	13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	KCNN2	Q9H2S1	579 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	ABCB10	Q9NRK6	738 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	DAPK2	Q9UIK4	370 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	GNG8	Q9UK08	70 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	MOK	Q9UQ07	419 aa		13.81	□□□□□ -0.2
BEST1-204	ENST00000524926	NSG1	A0A0A6YYJ2	146 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	PMS2P1	A4D2B8	440 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	DCTN6	O00399	190 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	DVL2	O14641	736 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	CALR	P27797	417 aa	Known RBP	13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	MSX1	P28360	303 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	TNFSF8	P32971	234 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	CAPZA2	P47755	286 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	DCDC5	Q6ZRR9	648 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	NAXD	Q8IW45	347 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	OR6V1	Q8N148	313 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	OR11G2	Q8NGC1	345 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	OR2T4	Q8NH00	348 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	SYT4	Q9H2B2	425 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	CCDC86	Q9H6F5	360 aa	Known RBP	13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	ZNF160	Q9HCG1	818 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	POLH	Q9Y253	713 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	IQCM	A0A1B0GVH7	501 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	TBX1	O43435	398 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	DXO	O77932	396 aa	Known RBP	13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	JMJD7	P0C870	316 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	OCM2	P0CE71	109 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	OCM	P0CE72	109 aa	Predicted RBP	13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	TFPI	P10646	304 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	TCN2	P20062	427 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	F8A1	P23610	371 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	GBX2	P52951	348 aa	Predicted RBP	13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	ACKR1	Q16570	336 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	PM20D2	Q8IYS1	436 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	EXD3	Q8N9H8	876 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	M1AP	Q8TC57	530 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	CHPT1	Q8WUD6	406 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	SLC30A2	Q9BRI3	323 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926	WDR70	Q9NW82	654 aa		13.8	□□□□□ -0.2
BEST1-204	ENST00000524926		H3BML4	177 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	PSMD9	O00233	223 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	PLPP3	O14495	311 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	TP53I11	O14683	189 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	IL11	P20809	199 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	GAL	P22466	123 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	GTF2E2	P29084	291 aa	Known RBP	13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	RPL27	P61353	136 aa	Known RBP	13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	RPS18	P62269	152 aa	Known RBP	13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	INSM1	Q01101	510 aa	Predicted RBP	13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	OR7A5	Q15622	319 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	CDON	Q4KMG0	1287 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	PRAMEF20	Q5VT98	475 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	CCDC190	Q86UF4	302 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	LAX1	Q8IWV1	398 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	SYS1	Q8N2H4	156 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms