RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 TMEM72A0PK05 275 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 LEUTXA8MZ59 168 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 KHNYNO15037 678 aaKnown RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 OIP5O43482 229 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 PRKNO60260 465 aaPredicted RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 KRT33AO76009 404 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 RPP14O95059 124 aaKnown RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 NSA2O95478 260 aaKnown RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 IGF2P01344 180 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 CD14P08571 375 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 TACSTD2P09758 323 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 THEGLP0DJG4 465 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 OR8G3PP0DMU2 310 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 PNMTP11086 282 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 PSMB1P20618 241 aaKnown RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 DNASE1P24855 282 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 UQCRC1P31930 480 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 DLX2Q07687 328 aaPredicted RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF74Q16587 644 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 STPG1Q5TH74 334 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 FNDC7Q5VTL7 733 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 PWWP2BQ6NUJ5 590 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 ATG4DQ86TL0 474 aaPredicted RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 ZSCAN1Q8NBB4 408 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 OR6C4Q8NGE1 309 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 ADAMTS18Q8TE60 1221 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 HMGB4Q8WW32 186 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 LIPHQ8WWY8 451 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 MOGAT1Q96PD6 335 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 NANSQ9NR45 359 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 KLHL9Q9P2J3 617 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 SCP2D1Q9UJQ7 156 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 FLVCR2Q9UPI3 526 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 FOXJ3Q9UPW0 622 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 MOKQ9UQ07 419 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 NPTNQ9Y639 398 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 A0A1W2PQ72 361 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 NAP1L6A6NFF2 107 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 B4DGG1 531 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 SULT1B1O43704 296 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 UPK3AO75631 287 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 IFNA16P05015 189 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 APEHP13798 732 aaKnown RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 SDHAP31040 664 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 ADH7P40394 386 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 PTH2RP49190 550 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 CTXN1P60606 82 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 ALKBH1Q13686 389 aaKnown RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 CD226Q15762 336 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 COL28A1Q2UY09 1125 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 LGALSLQ3ZCW2 172 aaPredicted RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 Q499Y3 187 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 ESCO2Q56NI9 601 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 ALG10Q5BKT4 473 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 ELFN2Q5R3F8 820 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 LIPNQ5VXI9 398 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 STAC2Q6ZMT1 411 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 MED25Q71SY5 747 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 KCTD20Q7Z5Y7 419 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 EID2Q8N6I1 236 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 C10orf53Q8N6V4 93 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 LSM14AQ8ND56 463 aaKnown RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 SYNPRQ8TBG9 265 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 S100A16Q96FQ6 103 aaKnown RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 ADAD1Q96M93 576 aaKnown RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 SORCS2Q96PQ0 1159 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 SPRTNQ9H040 489 aaPredicted RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 KLK11Q9UBX7 282 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 OR5V1Q9UGF6 321 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 MRM2Q9UI43 246 aaKnown RBP10.09□□□□□ -0.79
HDAC9-228ENST00000524023 KLHDC2Q9Y2U9 406 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 SLC6A5Q9Y345 797 aa10.09□□□□□ -0.79
HDAC9-228ENST00000524023 PRAF2O60831 178 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 TGM6O95932 706 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 RAB40ALP0C0E4 278 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 ASAH2BP0C7U1 165 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 CALCBP10092 127 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 VEGFCP49767 419 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 HSD17B7P56937 341 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 AP3S2P59780 193 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 RPL6Q02878 288 aaKnown RBP10.08□□□□□ -0.8
HDAC9-228ENST00000524023 EGR4Q05215 589 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 LTBQ06643 244 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 SKP2Q13309 424 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 CBLN3Q6UW01 205 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 SEZ6L2Q6UXD5 910 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 FAM220AQ7Z4H9 259 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 METTL27Q8N6F8 245 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-228ENST00000524023 OR5AK2Q8NH90 309 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 C1orf216Q8TAB5 229 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 PHOSPHO1Q8TCT1 267 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 FCAMRQ8WWV6 532 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 RAB40AQ8WXH6 277 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 MMABQ96EY8 250 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-228ENST00000524023 MAP3K3Q99759 626 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 MRI1Q9BV20 369 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF436Q9C0F3 470 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-228ENST00000524023 TCF7L1Q9HCS4 588 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 SRA1Q9HD15 236 aaKnown RBP10.08□□□□□ -0.8
HDAC9-228ENST00000524023 MMP25Q9NPA2 562 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms