RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 NCF2P19878 526 aaPredicted RBP19.55■□□□□ 0.72
PVT1-218ENST00000523328 GPR6P46095 362 aaPredicted RBP19.55■□□□□ 0.72
PVT1-218ENST00000523328 RPS5P46782 204 aaKnown RBP19.55■□□□□ 0.72
PVT1-218ENST00000523328 NME5P56597 212 aa19.55■□□□□ 0.72
PVT1-218ENST00000523328 ABCE1P61221 599 aaKnown RBP19.55■□□□□ 0.72
PVT1-218ENST00000523328 SLC9B1Q4ZJI4 515 aa19.55■□□□□ 0.72
PVT1-218ENST00000523328 SERPINA11Q86U17 422 aa19.55■□□□□ 0.72
PVT1-218ENST00000523328 C3orf56Q8N813 242 aa19.55■□□□□ 0.72
PVT1-218ENST00000523328 ZNF418Q8TF45 676 aaPredicted RBP19.55■□□□□ 0.72
PVT1-218ENST00000523328 FAM216AQ8WUB2 273 aa19.55■□□□□ 0.72
PVT1-218ENST00000523328 ZNF75AQ96N20 296 aa19.55■□□□□ 0.72
PVT1-218ENST00000523328 SORT1Q99523 831 aa19.55■□□□□ 0.72
PVT1-218ENST00000523328 MS4A5Q9H3V2 200 aa19.55■□□□□ 0.72
PVT1-218ENST00000523328 LPAR2Q9HBW0 351 aa19.55■□□□□ 0.72
PVT1-218ENST00000523328 P2RX2Q9UBL9 471 aa19.55■□□□□ 0.72
PVT1-218ENST00000523328 ZNF99A8MXY4 864 aaPredicted RBP19.54■□□□□ 0.72
PVT1-218ENST00000523328 RGS9O75916 674 aaPredicted RBP19.54■□□□□ 0.72
PVT1-218ENST00000523328 TFP02787 698 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 SERPINE1P05121 402 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 SAGP10523 405 aaPredicted RBP19.54■□□□□ 0.72
PVT1-218ENST00000523328 ACHEP22303 614 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 CAPZA2P47755 286 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 RPL14P50914 215 aaKnown RBP19.54■□□□□ 0.72
PVT1-218ENST00000523328 HILS1P60008 231 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 CHI3L2Q15782 390 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 PHYHD1Q5SRE7 291 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 ATG16L1Q676U5 607 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 OGFOD2Q6N063 350 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 TMEM123Q8N131 208 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 GCDHQ92947 438 aaPredicted RBP19.54■□□□□ 0.72
PVT1-218ENST00000523328 KTI12Q96EK9 354 aaPredicted RBP19.54■□□□□ 0.72
PVT1-218ENST00000523328 MS4A3Q96HJ5 214 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 LRRC37BQ96QE4 947 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 OR2M2Q96R28 347 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 OR52E6Q96RD3 313 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 NUF2Q9BZD4 464 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 SLC6A13Q9NSD5 602 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.54■□□□□ 0.72
PVT1-218ENST00000523328 GRIP1Q9Y3R0 1128 aa19.54■□□□□ 0.72
PVT1-218ENST00000523328 WDR91A4D1P6 747 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 BCHEP06276 602 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 GAAP10253 952 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 ZNF35P13682 527 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 TCN1P20061 433 aaPredicted RBP19.53■□□□□ 0.72
PVT1-218ENST00000523328 SCGB2A2Q13296 93 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 USP43Q70EL4 1123 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 PIK3C3Q8NEB9 887 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.53■□□□□ 0.72
PVT1-218ENST00000523328 RDH5Q92781 318 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 YIPF5Q969M3 257 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 AIG1Q9NVV5 245 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 TREM2Q9NZC2 230 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 CALML5Q9NZT1 146 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 PCDHB10Q9UN67 800 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 WNK2Q9Y3S1 2297 aa19.53■□□□□ 0.72
PVT1-218ENST00000523328 TRAF3IP2O43734 574 aaPredicted RBP19.52■□□□□ 0.72
PVT1-218ENST00000523328 KRT75O95678 551 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 HLA-HP01893 362 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 ETFAP13804 333 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 ZNF14P17017 642 aaPredicted RBP19.52■□□□□ 0.72
PVT1-218ENST00000523328 GTF2E2P29084 291 aaKnown RBP19.52■□□□□ 0.72
PVT1-218ENST00000523328 ALDH3B1P43353 468 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 SEC24CP53992 1094 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 CRISP3P54108 245 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 LMO4P61968 165 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 LRRC74AQ0VAA2 488 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 LARS2Q15031 903 aaKnown RBP19.52■□□□□ 0.72
PVT1-218ENST00000523328 RPS26P11Q5JNZ5 115 aaPredicted RBP19.52■□□□□ 0.72
PVT1-218ENST00000523328 SHQ1Q6PI26 577 aaKnown RBP19.52■□□□□ 0.72
PVT1-218ENST00000523328 THSD4Q6ZMP0 1018 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 C1orf229Q6ZS94 237 aaPredicted RBP19.52■□□□□ 0.72
PVT1-218ENST00000523328 PEG10Q86TG7 708 aaKnown RBP19.52■□□□□ 0.72
PVT1-218ENST00000523328 SLC38A5Q8WUX1 472 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 SYT3Q9BQG1 590 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 SPATA9Q9BWV2 254 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 MEAF6Q9HAF1 191 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 ZNF275Q9NSD4 429 aaPredicted RBP19.52■□□□□ 0.72
PVT1-218ENST00000523328 HAO1Q9UJM8 370 aa19.52■□□□□ 0.72
PVT1-218ENST00000523328 M0R082 166 aa19.51■□□□□ 0.71
PVT1-218ENST00000523328 GLRXP35754 106 aa19.51■□□□□ 0.71
PVT1-218ENST00000523328 ARFIP2P53365 341 aa19.51■□□□□ 0.71
PVT1-218ENST00000523328 TMEM33P57088 247 aa19.51■□□□□ 0.71
PVT1-218ENST00000523328 HOXC5Q00444 222 aa19.51■□□□□ 0.71
PVT1-218ENST00000523328 C1DQ13901 141 aaKnown RBP19.51■□□□□ 0.71
PVT1-218ENST00000523328 LRP11Q86VZ4 500 aa19.51■□□□□ 0.71
PVT1-218ENST00000523328 OR51F2Q8NH61 342 aa19.51■□□□□ 0.71
PVT1-218ENST00000523328 ZNF417Q8TAU3 575 aa19.51■□□□□ 0.71
PVT1-218ENST00000523328 ZNF587Q96SQ5 575 aaPredicted RBP19.51■□□□□ 0.71
PVT1-218ENST00000523328 ROPN1BQ9BZX4 212 aaPredicted RBP19.51■□□□□ 0.71
PVT1-218ENST00000523328 ROPN1Q9HAT0 212 aaPredicted RBP19.51■□□□□ 0.71
PVT1-218ENST00000523328 MYEF2Q9P2K5 600 aaKnown RBP19.51■□□□□ 0.71
PVT1-218ENST00000523328 LOC102725191A0A1B0GVB3 256 aa19.5■□□□□ 0.71
PVT1-218ENST00000523328 TRIM77I1YAP6 450 aa19.5■□□□□ 0.71
PVT1-218ENST00000523328 M0R3G1 203 aa19.5■□□□□ 0.71
PVT1-218ENST00000523328 AIM2O14862 343 aa19.5■□□□□ 0.71
PVT1-218ENST00000523328 NCR1O76036 304 aa19.5■□□□□ 0.71
PVT1-218ENST00000523328 AVPP01185 164 aa19.5■□□□□ 0.71
PVT1-218ENST00000523328 SLC1A6P48664 564 aa19.5■□□□□ 0.71
PVT1-218ENST00000523328 IFFO1Q0D2I5 559 aa19.5■□□□□ 0.71
PVT1-218ENST00000523328 MAD2L1BPQ15013 274 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms