RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 OPTCQ9UBM4 332 aa5.72□□□□□ -1.49
SDCBP-210ENST00000522843 ABCG2Q9UNQ0 655 aa5.72□□□□□ -1.49
SDCBP-210ENST00000522843 CCL27Q9Y4X3 112 aa5.72□□□□□ -1.49
SDCBP-210ENST00000522843 PTGDR2Q9Y5Y4 395 aa5.72□□□□□ -1.49
SDCBP-210ENST00000522843 A0A1W2PRB8 838 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 B4DSR2 109 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 DIRC3C9JPN6 131 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 LYNX1G3V0Z9 82 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 H0YIV9 168 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 SLC28A1O00337 649 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 WNT9BO14905 357 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 ANGPTL1O95841 491 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 IGKV1D-16P01601 117 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 KLK1P06870 262 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 LYNX1P0DP58 116 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 CSNK2A2P19784 350 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 CALB2P22676 271 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 ELLP55199 621 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 FOXA1P55317 472 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 CARD18P57730 90 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 CLRN1P58418 232 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 EMX2Q04743 252 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 CSTF3Q12996 717 aaKnown RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 RNPS1Q15287 305 aaKnown RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 GSTA3Q16772 222 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 PLPPR5Q32ZL2 321 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 FCRLAQ7L513 359 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 CARM1Q86X55 608 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 ZCCHC24Q8N2G6 241 aaKnown RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 TEX9Q8N6V9 391 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 OR7G2Q8NG99 324 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 OR4F6Q8NGB9 312 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 OR9A2Q8NGT5 310 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 RP9Q8TA86 221 aaKnown RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 METTL6Q8TCB7 284 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF675Q8TD23 568 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 SLC9A6Q92581 669 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 TMEM186Q96B77 213 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF524Q96C55 264 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 TM4SF18Q96CE8 201 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 LRGUKQ96M69 825 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 C1orf147Q96MC9 270 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 OR52B2Q96RD2 323 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF300Q96RE9 604 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 VRK1Q99986 396 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 CENPKQ9BS16 269 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 MRPL1Q9BYD6 325 aaKnown RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 NUF2Q9BZD4 464 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 NMUR2Q9GZQ4 415 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 MMADHCQ9H3L0 296 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 G6PC2Q9NQR9 355 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 SDHAF3Q9NRP4 125 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 MED17Q9NVC6 651 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 FAM120CQ9NX05 1096 aaKnown RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 ASIC5Q9NY37 505 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 MARCOQ9UEW3 520 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-210ENST00000522843 PPIAL4AQ9Y536 164 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 WNK2Q9Y3S1 2297 aa5.71□□□□□ -1.5
SDCBP-210ENST00000522843 TENM3Q9P273 2699 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 C1orf226A1L170 272 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 CFAP73A6NFT4 308 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 TMEM233B4DJY2 109 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 FOXE1O00358 373 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-210ENST00000522843 OR4F21O95013 312 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 CHEK2O96017 543 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 IGHV3-9P01782 118 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 KRT6AP02538 564 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 KRT6BP04259 564 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 HSD3B1P14060 373 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 DAOP14920 347 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 LBPP18428 481 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 PCMT1P22061 227 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 EPHA3P29320 983 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 SFTPDP35247 375 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 KRT20P35900 424 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 KRT6CP48668 564 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 CCNG1P51959 295 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 TP53BP2Q13625 1128 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 KIAA0040Q15053 153 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 GABRA6Q16445 453 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 GRAMD1BQ3KR37 738 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 CPTPQ5TA50 214 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 KLHL17Q6TDP4 642 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 RPS27LQ71UM5 84 aaKnown RBP5.7□□□□□ -1.5
SDCBP-210ENST00000522843 SSX8Q7RTT4 187 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF786Q8N393 782 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 PRR18Q8N4B5 295 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 CLDND2Q8NHS1 167 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 TWIST2Q8WVJ9 160 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 EXT2Q93063 718 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 KLHL29Q96CT2 875 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 LRRC58Q96CX6 371 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 ERP27Q96DN0 273 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 CMTM5Q96DZ9 223 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 THOC1Q96FV9 657 aaKnown RBP5.7□□□□□ -1.5
SDCBP-210ENST00000522843 C3orf30Q96M34 536 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 RACGAP1Q9H0H5 632 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 SLITRK2Q9H156 845 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 LRMDAQ9H2I8 198 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 PLK3Q9H4B4 646 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms