RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 TMEM19Q96HH6 336 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 TPT1P8Q9HAU6 139 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 CRLF2Q9HC73 371 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 USP22Q9UPT9 525 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 CMAHPQ9Y471 501 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 SH3PXD2BA1X283 911 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 TRPC5OSA6NMA1 111 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 ZNF99A8MXY4 864 aaPredicted RBP12.86□□□□□ -0.35
PRKDC-204ENST00000521331 SLC22A3O75751 556 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 ANP32DO95626 131 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 ADRA2AP08913 450 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 IDO1P14902 403 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 CAPZA2P47755 286 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 EVX1P49640 407 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 DVL1P1P54792 670 aaPredicted RBP12.86□□□□□ -0.35
PRKDC-204ENST00000521331 EGR4Q05215 589 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 BST1Q10588 318 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 SNTB2Q13425 540 aaKnown RBP12.86□□□□□ -0.35
PRKDC-204ENST00000521331 CEACAM16Q2WEN9 425 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 ZNF311Q5JNZ3 666 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 RPS26P11Q5JNZ5 115 aaPredicted RBP12.86□□□□□ -0.35
PRKDC-204ENST00000521331 C6orf89Q6UWU4 347 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 MDP1Q86V88 176 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 CDK20Q8IZL9 346 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 KTI12Q96EK9 354 aaPredicted RBP12.86□□□□□ -0.35
PRKDC-204ENST00000521331 RMND5AQ9H871 391 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 C12orf10Q9HB07 376 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 NOX3Q9HBY0 568 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 SLC6A13Q9NSD5 602 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 B3GAT1Q9P2W7 334 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 RPS6KB2Q9UBS0 482 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 CHST2Q9Y4C5 530 aa12.86□□□□□ -0.35
PRKDC-204ENST00000521331 A0A0A6YYJ9 748 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 LOC102725191A0A1B0GVB3 256 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 B4DSR2 109 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 SLCO1B7G3V0H7 640 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 HDAC3O15379 428 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 ITGA2P17301 1181 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 EPHA3P29320 983 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 IL1RL1Q01638 556 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 PDCD4Q53EL6 469 aaKnown RBP12.85□□□□□ -0.35
PRKDC-204ENST00000521331 FAM69AQ5T7M9 428 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 KRT80Q6KB66 452 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 MSANTD1Q6ZTZ1 278 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 NET1Q7Z628 596 aaPredicted RBP12.85□□□□□ -0.35
PRKDC-204ENST00000521331 SLC38A4Q969I6 547 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 ITCHQ96J02 903 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 OR2M2Q96R28 347 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 METRNQ9UJH8 293 aa12.85□□□□□ -0.35
PRKDC-204ENST00000521331 ZNF503-AS2A6NEH8 195 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 M0R082 166 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 SYNGR3O43761 229 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 IGFBP1P08833 259 aaPredicted RBP12.84□□□□□ -0.35
PRKDC-204ENST00000521331 NR4A1P22736 598 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 SCGB2A2Q13296 93 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 MFSD13AQ14CX5 517 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 TRIP10Q15642 601 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 REP15Q6BDI9 236 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 C12orf54Q6X4T0 127 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 H1FNTQ75WM6 255 aaPredicted RBP12.84□□□□□ -0.35
PRKDC-204ENST00000521331 GLCCI1Q86VQ1 547 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 TMEM123Q8N131 208 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 MREGQ8N565 214 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 ADPRHL1Q8NDY3 354 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 ZNF417Q8TAU3 575 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 ZFAND2BQ8WV99 257 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 TAAR8Q969N4 342 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 MRPL24Q96A35 216 aaKnown RBP12.84□□□□□ -0.35
PRKDC-204ENST00000521331 ZNF837Q96EG3 531 aaPredicted RBP12.84□□□□□ -0.35
PRKDC-204ENST00000521331 ZNF587Q96SQ5 575 aaPredicted RBP12.84□□□□□ -0.35
PRKDC-204ENST00000521331 PAIP2Q9BPZ3 127 aaKnown RBP12.84□□□□□ -0.35
PRKDC-204ENST00000521331 MS4A5Q9H3V2 200 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 WDR55Q9H6Y2 383 aaPredicted RBP12.84□□□□□ -0.35
PRKDC-204ENST00000521331 BCL2L10Q9HD36 194 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 KCNK9Q9NPC2 374 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 ZIM2Q9NZV7 527 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 SEC14L4Q9UDX3 406 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 SPEF1Q9Y4P9 236 aa12.84□□□□□ -0.35
PRKDC-204ENST00000521331 TRAV36DV7A0A075B6V5 113 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 M0R233 179 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 TRAF3IP2O43734 574 aaPredicted RBP12.83□□□□□ -0.36
PRKDC-204ENST00000521331 GRPRP30550 384 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 HOXC5Q00444 222 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 CCNIQ14094 377 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 MPP2Q14168 576 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 GSG1Q2KHT4 349 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 SLC9B1Q4ZJI4 515 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 NXNQ6DKJ4 435 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 WDR93Q6P2C0 686 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 DEF8Q6ZN54 512 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 RINLQ6ZS11 566 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 SNX32Q86XE0 403 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 C20orf196Q8IYI0 205 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 LSMEM1Q8N8F7 131 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 BBS10Q8TAM1 723 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 DNAJA4Q8WW22 397 aaPredicted RBP12.83□□□□□ -0.36
PRKDC-204ENST00000521331 LRR1Q96L50 414 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 MRPL37Q9BZE1 423 aaKnown RBP12.83□□□□□ -0.36
PRKDC-204ENST00000521331 TPK1Q9H3S4 243 aa12.83□□□□□ -0.36
PRKDC-204ENST00000521331 RAD21L1Q9H4I0 556 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms