RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 CALHM3Q86XJ0 350 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 SCAIQ8N9R8 606 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 OR8J3Q8NGG0 315 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 OR4D11Q8NGI4 311 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 MAGEE2Q8TD90 523 aaPredicted RBP14.91□□□□□ -0.02
SQLE-205ENST00000521232 BCL2L2Q92843 193 aaPredicted RBP14.91□□□□□ -0.02
SQLE-205ENST00000521232 TAMM41Q96BW9 452 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 ZNF317Q96PQ6 595 aaPredicted RBP14.91□□□□□ -0.02
SQLE-205ENST00000521232 BBIP1A8MTZ0 92 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 FXYD1O00168 92 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 TRAF3IP2O43734 574 aaPredicted RBP14.9□□□□□ -0.02
SQLE-205ENST00000521232 SLC43A1O75387 559 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 LY6G6DO95868 133 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 HEXAP06865 529 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 HOXB1P14653 301 aaPredicted RBP14.9□□□□□ -0.02
SQLE-205ENST00000521232 CBLP22681 906 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 CRYBA2P53672 197 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 ROR2Q01974 943 aaKnown RBP14.9□□□□□ -0.02
SQLE-205ENST00000521232 GUCY1A3Q02108 690 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 MAPRE2Q15555 327 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 KRTAP21-3Q3LHN1 58 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 MMEL1Q495T6 779 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 RABL3Q5HYI8 236 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 ENTPD8Q5MY95 495 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 HMBOX1Q6NT76 420 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 KLHL24Q6TFL4 600 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 B3GLCTQ6Y288 498 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 RBM45Q8IUH3 476 aaKnown RBP14.9□□□□□ -0.02
SQLE-205ENST00000521232 SLC26A7Q8TE54 656 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 RASSF5Q8WWW0 418 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 ALKBH3Q96Q83 286 aaPredicted RBP14.9□□□□□ -0.02
SQLE-205ENST00000521232 FKRPQ9H9S5 495 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 MRPL39Q9NYK5 338 aaKnown RBP14.9□□□□□ -0.02
SQLE-205ENST00000521232 POU2F3Q9UKI9 436 aa14.9□□□□□ -0.02
SQLE-205ENST00000521232 ARPC4-TTLL3A0A0A6YYG9 625 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 LOC100653049A0A140TA62 436 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 SMAD7O15105 426 aaKnown RBP14.89□□□□□ -0.03
SQLE-205ENST00000521232 CHP2O43745 196 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 KRT34O76011 436 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 LYPD3O95274 346 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 HPRP00739 348 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 THY1P04216 161 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 NQO1P15559 274 aaKnown RBP14.89□□□□□ -0.03
SQLE-205ENST00000521232 SH3BGRP55822 239 aaPredicted RBP14.89□□□□□ -0.03
SQLE-205ENST00000521232 SF3A3Q12874 501 aaKnown RBP eCLIP14.89□□□□□ -0.03
SQLE-205ENST00000521232 TNK1Q13470 666 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 VEZF1Q14119 521 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 CLEC12BQ2HXU8 276 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 REP15Q6BDI9 236 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 C11orf71Q6IPW1 123 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 ZNF544Q6NX49 715 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 ANKRD16Q6P6B7 361 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 Q71RC1 249 aaPredicted RBP14.89□□□□□ -0.03
SQLE-205ENST00000521232 UEVLDQ8IX04 471 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 TMEM123Q8N131 208 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 MUC15Q8N387 334 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 ZNF583Q96ND8 569 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 MOGAT1Q96PD6 335 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 OR2M2Q96R28 347 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 ECSITQ9BQ95 431 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 ASPNQ9BXN1 380 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 PCDHAC1Q9H158 963 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 NELFAQ9H3P2 528 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 CBLN4Q9NTU7 201 aa14.89□□□□□ -0.03
SQLE-205ENST00000521232 FN1P02751 2386 aaKnown RBP14.89□□□□□ -0.03
SQLE-205ENST00000521232 HIVEP2P31629 2446 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 CPSF4LA6NMK7 179 aaKnown RBP14.88□□□□□ -0.03
SQLE-205ENST00000521232 LRRN3E7EW58 273 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 PLPP3O14495 311 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 MRASO14807 208 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 AKAP8O43823 692 aaKnown RBP14.88□□□□□ -0.03
SQLE-205ENST00000521232 MT-ATP6P00846 226 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 IGHV4-39P01824 125 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 HLA-DOBP13765 273 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 PTNP21246 168 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 FABP6P51161 128 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 UBE2NP61088 152 aaKnown RBP14.88□□□□□ -0.03
SQLE-205ENST00000521232 PMS2P3Q13401 168 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 C3orf36Q3SXR2 165 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 HSP90B2PQ58FF3 399 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 WDR88Q6ZMY6 472 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 DNM1P46Q6ZS02 220 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 TSPYL5Q86VY4 417 aaPredicted RBP14.88□□□□□ -0.03
SQLE-205ENST00000521232 FBXL14Q8N1E6 418 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 GPR137CQ8N3F9 429 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 PCYOX1LQ8NBM8 494 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 PIK3C3Q8NEB9 887 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 ADAMTS16Q8TE57 1224 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 LRR1Q96L50 414 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 GPR35Q9HC97 309 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 MED4Q9NPJ6 270 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 CRNNQ9UBG3 495 aaPredicted RBP14.88□□□□□ -0.03
SQLE-205ENST00000521232 NOX1Q9Y5S8 564 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 ATP23Q9Y6H3 246 aa14.88□□□□□ -0.03
SQLE-205ENST00000521232 ANK3Q12955 4377 aaKnown RBP14.87□□□□□ -0.03
SQLE-205ENST00000521232 A0A096LPE4 126 aa14.87□□□□□ -0.03
SQLE-205ENST00000521232 IGHV1-18A0A0C4DH31 117 aa14.87□□□□□ -0.03
SQLE-205ENST00000521232 A0A1W2PPZ6 126 aa14.87□□□□□ -0.03
SQLE-205ENST00000521232 TRAPPC13A5PLN9 417 aa14.87□□□□□ -0.03
SQLE-205ENST00000521232 SLC22A2O15244 555 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms