RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 NOX4Q9NPH5 578 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 MRPS18AQ9NVS2 196 aaKnown RBP10.34□□□□□ -0.75
CLK4-206ENST00000520878 SHISA3A0PJX4 238 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 TSC22D2O75157 780 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 IGHA1P01876 353 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 CSF3P09919 207 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 RNF4P78317 190 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 EFNB1P98172 346 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLK4-206ENST00000520878 ZFP69Q49AA0 526 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 LRRN1Q6UXK5 716 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 LRRC69Q6ZNQ3 347 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 TMEM156Q8N614 296 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 OR10H5Q8NGA6 315 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 C1orf216Q8TAB5 229 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 PELI1Q96FA3 418 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 CCDC74BQ96LY2 380 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 INIPQ9NRY2 104 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 PTRH2Q9Y3E5 179 aaKnown RBP10.34□□□□□ -0.75
CLK4-206ENST00000520878 IDH3BO43837 385 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 TIAF1O95411 115 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 DDAH2O95865 285 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 CD97P48960 835 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 ZNF41P51814 821 aaPredicted RBP10.33□□□□□ -0.76
CLK4-206ENST00000520878 GAS1P54826 345 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 ADAM8P78325 824 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 GFOD2Q3B7J2 385 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 LIPNQ5VXI9 398 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 TMPRSS9Q7Z410 1059 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 MRGPREQ86SM8 312 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 UXS1Q8NBZ7 420 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 ZNF417Q8TAU3 575 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 ZNF721Q8TF20 911 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 ZNF587Q96SQ5 575 aaPredicted RBP10.33□□□□□ -0.76
CLK4-206ENST00000520878 EMC6Q9BV81 110 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 INPP5EQ9NRR6 644 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 COPS3Q9UNS2 423 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 GLCEO94923 617 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 EVI2BP34910 448 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 MAP3K8P41279 467 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 PAMR1Q6UXH9 720 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 TMPRSS12Q86WS5 348 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 SLC38A9Q8NBW4 561 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 OR4M1Q8NGD0 313 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 ZNRF4Q8WWF5 429 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 NKX3-1Q99801 234 aaPredicted RBP10.33□□□□□ -0.76
CLK4-206ENST00000520878 ATF6BQ99941 703 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 RTN4RQ9BZR6 473 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 PCED1AQ9H1Q7 454 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 ISYNA1Q9NPH2 558 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 MYEF2Q9P2K5 600 aaKnown RBP10.33□□□□□ -0.76
CLK4-206ENST00000520878 POLHQ9Y253 713 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 SF3B6Q9Y3B4 125 aaKnown RBP10.33□□□□□ -0.76
CLK4-206ENST00000520878 C9J4A7 227 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 KHDRBS3O75525 346 aaKnown RBP10.33□□□□□ -0.76
CLK4-206ENST00000520878 ITGA10O75578 1167 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 LYPD3O95274 346 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 FGF9P31371 208 aaPredicted RBP10.33□□□□□ -0.76
CLK4-206ENST00000520878 ADH7P40394 386 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 POU3F1Q03052 451 aaPredicted RBP10.33□□□□□ -0.76
CLK4-206ENST00000520878 TLE3Q04726 772 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 SKP2Q13309 424 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 TAF13Q15543 124 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 ZNF79Q15937 498 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 ZNF362Q5T0B9 420 aaPredicted RBP10.33□□□□□ -0.76
CLK4-206ENST00000520878 OR7E24Q6IFN5 339 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 OR5AK2Q8NH90 309 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 ZNF501Q96CX3 271 aaPredicted RBP10.33□□□□□ -0.76
CLK4-206ENST00000520878 INTS14Q96SY0 518 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 WDR76Q9H967 626 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 AKIRIN1Q9H9L7 192 aaPredicted RBP10.33□□□□□ -0.76
CLK4-206ENST00000520878 UCK1Q9HA47 277 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 SDHAF3Q9NRP4 125 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 AKAP7Q9P0M2 348 aaPredicted RBP10.33□□□□□ -0.76
CLK4-206ENST00000520878 CHRNA9Q9UGM1 479 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 CACNA1HO95180 2353 aa10.33□□□□□ -0.76
CLK4-206ENST00000520878 TEX51A0A1B0GUA7 166 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 TCRBV16S1A1N1A0A5B0 115 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 MEIOCA2RUB1 952 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 ENDOUP21128 410 aaKnown RBP10.32□□□□□ -0.76
CLK4-206ENST00000520878 EPHA8P29322 1005 aaPredicted RBP10.32□□□□□ -0.76
CLK4-206ENST00000520878 GUCA1AP43080 201 aaPredicted RBP10.32□□□□□ -0.76
CLK4-206ENST00000520878 ACKR1Q16570 336 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 MEP1BQ16820 701 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 CEP78Q5JTW2 689 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 TMEM225Q6GV28 225 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 C19orf48Q6RUI8 117 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 TOMM5Q8N4H5 51 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 ZBTB8BQ8NAP8 495 aaPredicted RBP10.32□□□□□ -0.76
CLK4-206ENST00000520878 NPEPL1Q8NDH3 523 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 IFI44Q8TCB0 444 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 NKD1Q969G9 470 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 RFT1Q96AA3 541 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 NXF2Q9GZY0 626 aaKnown RBP10.32□□□□□ -0.76
CLK4-206ENST00000520878 LAT2Q9GZY6 243 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 PPIL3Q9H2H8 161 aaKnown RBP10.32□□□□□ -0.76
CLK4-206ENST00000520878 B3GAT2Q9NPZ5 323 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 ANKRD10Q9NXR5 420 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 V9GYH0 126 aa10.32□□□□□ -0.76
CLK4-206ENST00000520878 MPDZO75970 2070 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms