RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 HOXD1Q9GZZ0 328 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 BEX1Q9HBH7 125 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 LPAR2Q9HBW0 351 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 FGFR1OP2Q9NVK5 253 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 OXSMQ9NWU1 459 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 MBD2Q9UBB5 411 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 CRNNQ9UBG3 495 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 VPS29Q9UBQ0 182 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 DCDC2Q9UHG0 476 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 TMCO1Q9UM00 188 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 SNX6Q9UNH7 406 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 SLC9A8Q9Y2E8 581 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 SPIN1Q9Y657 262 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 TANC2Q9HCD6 1990 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PPIAL4EA0A075B759 164 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PPIAL4CA0A0B4J2A2 164 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 IGHV1-18A0A0C4DH31 117 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 GNG14A0A1W2PPG7 69 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 CFAP73A6NFT4 308 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 ZNF716A6NP11 495 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 CXorf49A8MYA2 514 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 TRIM49D1C9J1S8 452 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PPIAL4DF5H284 164 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 M0R233 179 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 SULT2B1O00204 365 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PSMD9O00233 223 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 UPK1AO00322 258 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 ANKRD28O15084 1053 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 BIRC5O15392 142 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 TXNL1O43396 289 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 SYNGR3O43761 229 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 EDF1O60869 148 aaKnown RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 DCTN3O75935 186 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 NKX2-2O95096 273 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 MPZL1O95297 269 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PMS2P2O95744 297 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 OTCP00480 354 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 NPPAP01160 153 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 IGHV3-9P01782 118 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 GSNP06396 782 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 IL3P08700 152 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PPIAL4FP0DN26 164 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PRPS2P11908 318 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 IDO1P14902 403 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 TMEM11P17152 192 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PRKCAP17252 672 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 DDCP20711 480 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 MDKP21741 143 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 EDNRAP25101 427 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 CRABP2P29373 138 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 GABRA3P34903 492 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 SPRP35270 261 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 SOX6P35712 828 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PRIM2P49643 509 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 DIO1P49895 249 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 NCBP2P52298 156 aaKnown RBP eCLIP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 UBE2NP61088 152 aaKnown RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 RPL15P61313 204 aaKnown RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 LMO4P61968 165 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 SLC25A3Q00325 362 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 NAAAQ02083 359 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 ZNF117Q03924 483 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 BAMBIQ13145 260 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 CBFBQ13951 182 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PDCD1Q15116 288 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 MAPRE2Q15555 327 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PFKFB4Q16877 469 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 C21orf62-AS1Q17RA5 79 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 GALNTL6Q49A17 601 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 ARMCX4Q5H9R4 360 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 ELFN2Q5R3F8 820 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 VAX1Q5SQQ9 334 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 MROH9Q5TGP6 573 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 FAM205BPQ63HN1 556 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 ATG16L1Q676U5 607 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 ZCCHC12Q6PEW1 402 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 CASP12Q6UXS9 341 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 TMPPEQ6ZT21 453 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 C4orf33Q8N1A6 199 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 C1orf52Q8N6N3 182 aaKnown RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 SIGLECL1Q8N7X8 197 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 POMGNT2Q8NAT1 580 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 OR4F5Q8NH21 305 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 OR4C3Q8NH37 302 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PHOSPHO1Q8TCT1 267 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 MAGEE2Q8TD90 523 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 TCP10LQ8TDR4 215 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 GPR151Q8TDV0 419 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 SELENOMQ8WWX9 145 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 TMEM234Q8WY98 164 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 ST8SIA1Q92185 356 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 TMIGD2Q96BF3 282 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 ELP4Q96EB1 424 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 APOPT1Q96IL0 206 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 KIRREL1Q96J84 757 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 OR5B2Q96R09 309 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 C1QTNF6Q9BXI9 259 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 MMADHCQ9H3L0 296 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 ZNF385DQ9H6B1 395 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 ZNF665Q9H7R5 613 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms