RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 RNF17Q9BXT8 1623 aaKnown RBP2.67□□□□□ -1.98
VPS13B-207ENST00000518569 ZMYM4Q5VZL5 1548 aa2.67□□□□□ -1.98
VPS13B-207ENST00000518569 DISP1Q96F81 1524 aa2.67□□□□□ -1.98
VPS13B-207ENST00000518569 ARHGEF12Q9NZN5 1544 aa2.67□□□□□ -1.98
VPS13B-207ENST00000518569 NCOA1Q15788 1441 aa2.67□□□□□ -1.98
VPS13B-207ENST00000518569 ELP1O95163 1332 aa2.67□□□□□ -1.98
VPS13B-207ENST00000518569 PHLPP2Q6ZVD8 1323 aa2.67□□□□□ -1.98
VPS13B-207ENST00000518569 ITSN2Q9NZM3 1697 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 ABCA8O94911 1581 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 METP08581 1390 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 PHLPP1O60346 1717 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 A0A0U1RQV5 110 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 A0A1B0GUH1 482 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 OR5K4A6NMS3 321 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 GOLGA8KD6RF30 607 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 E7ENQ6 273 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 E7ESA3 106 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 PDXKO00764 312 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 TNFSF11O14788 317 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 HAT1O14929 419 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 TRAPPC3O43617 180 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 DFNA5O60443 496 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 JAK2O60674 1132 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 CABYRO75952 493 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 FTH1P02794 183 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 IL6P05231 212 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 ANXA5P08758 320 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 IDO1P14902 403 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 H2AFXP16104 143 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 HOXB8P17481 243 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 EIF2S2P20042 333 aaKnown RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 TCN1P20061 433 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 RAB4AP20338 218 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 HOXA9P31269 272 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 OTX1P32242 354 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 CDH5P33151 784 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 ACVR1BP36896 505 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 NAA10P41227 235 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 NAMPTP43490 491 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 HTR5AP47898 357 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 RGS4P49798 205 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 PPT1P50897 306 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 RIPPLY3P57055 190 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 MAGOHP61326 146 aaKnown RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 POLR2GP62487 172 aaKnown RBP eCLIP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 XIAPP98170 497 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 BST1Q10588 318 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 ART3Q13508 389 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 RCAN2Q14206 197 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 MESDQ14696 234 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 CDKN3Q16667 212 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 XKR7Q5GH72 579 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 RABGAP1LQ5R372 815 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 TTC23Q5W5X9 447 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 PLEKHG7Q6ZR37 379 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 COPS6Q7L5N1 327 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 GPR65Q8IYL9 337 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 CADM2Q8N3J6 435 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 GATSQ8NAP1 163 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 OR4K14Q8NGD5 310 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 ING5Q8WYH8 240 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 EMG1Q92979 244 aaKnown RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 TADA1Q96BN2 335 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 GLT1D1Q96MS3 346 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 NPY6RQ99463 290 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 NPAS2Q99743 824 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 CENPKQ9BS16 269 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 FEM1AQ9BSK4 669 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 CHRDL1Q9BU40 450 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 TM2D1Q9BX74 207 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 YTHDF1Q9BYJ9 559 aaKnown RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 C6orf62Q9GZU0 229 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 POLR3FQ9H1D9 316 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 KAT8Q9H7Z6 458 aaKnown RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 GEMIN7Q9H840 131 aaKnown RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 LPAR2Q9HBW0 351 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 MIEF1Q9NQG6 463 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 APOBEC3BQ9UH17 382 aaKnown RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 PAIP2BQ9ULR5 123 aaKnown RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 MOKQ9UQ07 419 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 PIGLQ9Y2B2 252 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 SAMHD1Q9Y3Z3 626 aaKnown RBP2.66□□□□□ -1.98
VPS13B-207ENST00000518569 GMPPBQ9Y5P6 360 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 ALKQ9UM73 1620 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 MROH2AA6NES4 1674 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 ADGBQ8N7X0 1667 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 ABCC4O15439 1325 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 SETBP1Q9Y6X0 1596 aa2.66□□□□□ -1.98
VPS13B-207ENST00000518569 EP400Q96L91 3159 aa2.65□□□□□ -1.98
VPS13B-207ENST00000518569 DENND4BO75064 1496 aaPredicted RBP2.65□□□□□ -1.98
VPS13B-207ENST00000518569 NEO1Q92859 1461 aa2.65□□□□□ -1.98
VPS13B-207ENST00000518569 ABCA6Q8N139 1617 aa2.65□□□□□ -1.98
VPS13B-207ENST00000518569 RALGAPA1Q6GYQ0 2036 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 IGLV8-61A0A075B6I0 122 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 TRAV26-1A0A087WT03 109 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 MGAT4DA6NG13 374 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 FRG2CA6NGY1 282 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 GOLGA8JA6NMD2 632 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 WASHC1A8K0Z3 465 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 WASH3PC4AMC7 463 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 956.5 ms