RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 C2orf73Q8N5S3 287 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 NAT8LQ8N9F0 302 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 C19orf18Q8NEA5 215 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 B3GNT7Q8NFL0 401 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 TTLQ8NG68 377 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 OR4C13Q8NGP0 309 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 OR1N2Q8NGR9 330 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 OR6N1Q8NGY5 312 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 HPDLQ96IR7 371 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 ZNF681Q96N22 645 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 NAP1L3Q99457 506 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 LSG1Q9H089 658 aaKnown RBP-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 GANQ9H2C0 597 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 LINC00597Q9H2U6 94 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 ZDHHC6Q9H6R6 413 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 RNF167Q9H6Y7 350 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 PPCSQ9HAB8 311 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 NIT2Q9NQR4 276 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 ZNF302Q9NR11 478 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 C8orf17Q9NRJ1 99 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 OLA1Q9NTK5 396 aaKnown RBP-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 GPR132Q9UNW8 380 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 ZNF443Q9Y2A4 671 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 FKBP7Q9Y680 259 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 ARFGEF3Q5TH69 2177 aa-1.45□□□□□ -2.64
RNU6-557P-201ENST00000516842 SSH2Q76I76 1423 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 PTPRUQ92729 1446 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 VSTM2BA6NLU5 285 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 PP2D1A8MPX8 630 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 KBTBD13C9JR72 458 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 H3BMQ9 156 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 H3BNH8 94 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 CASKO14936 926 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 CTAGE5O15320 804 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 MFN2O95140 757 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 HLA-DPB1P04440 258 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 MMP7P09237 267 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 ACSM4P0C7M7 580 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 OR8U9P0C7N5 309 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 GKN3PP0CG01 181 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 THRAP10827 490 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 XRCC1P18887 633 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 HOXD13P35453 343 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 NUMBP49757 651 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 FOXA1P55317 472 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 TAS2R31P59538 309 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 ARF3P61204 181 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 ARF1P84077 181 aaKnown RBP-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 G3BP1Q13283 466 aaKnown RBP eCLIP-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 CYTH1Q15438 398 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 RGNQ15493 299 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 STXBP2Q15833 593 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 ZNF77Q15935 545 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 NDUFA9Q16795 377 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 ADPRMQ3LIE5 342 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 TIGITQ495A1 244 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 CYBRD1Q53TN4 286 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 LIN9Q5TKA1 542 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 CBLN3Q6UW01 205 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 Q6ZRU5 148 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 OLIG3Q7RTU3 272 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 LINC01561Q8N1V8 128 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 EIF4E3Q8N5X7 224 aaKnown RBP-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 LINC00469Q8N7U9 141 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 OR5L2Q8NGL0 311 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 ST8SIA1Q92185 356 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 HAS2Q92819 552 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 FGF11Q92914 225 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 MR1Q95460 341 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 OBSCN-AS1Q96MR7 158 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 TIGD1Q96MW7 591 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 DEFB118Q96PH6 123 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 TSSK3Q96PN8 268 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 SEC62Q99442 399 aaKnown RBP-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 CITED1Q99966 193 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 ARPC5LQ9BPX5 153 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 GABARAPL3Q9BY60 117 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 TBL1XR1Q9BZK7 514 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 FGF23Q9GZV9 251 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 SYNCQ9H7C4 482 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 POPDC2Q9HBU9 364 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 UTP6Q9NYH9 597 aaKnown RBP-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 ERVK-18Q9QC07 812 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 NFKBIL1Q9UBC1 381 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 WARS2Q9UGM6 360 aaKnown RBP-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 GMPPBQ9Y5P6 360 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 PASKQ96RG2 1323 aa-1.46□□□□□ -2.64
RNU6-557P-201ENST00000516842 ALPK2Q86TB3 2170 aa-1.47□□□□□ -2.64
RNU6-557P-201ENST00000516842 SPATA31E1Q6ZUB1 1445 aa-1.47□□□□□ -2.64
RNU6-557P-201ENST00000516842 ZNF106Q9H2Y7 1883 aaKnown RBP-1.47□□□□□ -2.64
RNU6-557P-201ENST00000516842 IGHV1-3A0A0C4DH29 117 aa-1.47□□□□□ -2.64
RNU6-557P-201ENST00000516842 ERICH4A6NGS2 130 aa-1.47□□□□□ -2.64
RNU6-557P-201ENST00000516842 ODF3BA8MYP8 253 aa-1.47□□□□□ -2.64
RNU6-557P-201ENST00000516842 C12orf77C9JDV5 145 aa-1.47□□□□□ -2.64
RNU6-557P-201ENST00000516842 PRAMEF26H0Y7S4 382 aa-1.47□□□□□ -2.64
RNU6-557P-201ENST00000516842 DOK2O60496 412 aa-1.47□□□□□ -2.64
RNU6-557P-201ENST00000516842 GMNNO75496 209 aa-1.47□□□□□ -2.64
RNU6-557P-201ENST00000516842 FABP3P05413 133 aa-1.47□□□□□ -2.64
RNU6-557P-201ENST00000516842 SMIM10L1P0DMW3 83 aa-1.47□□□□□ -2.64
RNU6-557P-201ENST00000516842 UROSP10746 265 aa-1.47□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms