RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 TMEM184AQ6ZMB5 413 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF836Q6ZNA1 936 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 SLC35D2Q76EJ3 337 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF761Q86XN6 746 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 SLC25A46Q96AG3 418 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 MSI2Q96DH6 328 aaKnown RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 GPR78Q96P69 363 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF768Q9H5H4 540 aaKnown RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 PCDHGA1Q9Y5H4 931 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ETV7Q9Y603 341 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 CPNE6O95741 557 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 CHRM4P08173 479 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 TRHRP34981 398 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 CTSCP53634 463 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 GP2P55259 537 aaKnown RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 HBG1P69891 147 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 HBG2P69892 147 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 HABP2Q14520 560 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ZMAT1Q5H9K5 638 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 FAM111BQ6SJ93 734 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 NLRC3Q7RTR2 1065 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 NANOS1Q8WY41 292 aaKnown RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 FAM3CQ92520 227 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 SLCO5A1Q9H2Y9 848 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 SULT2B1O00204 365 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 PAPLNO95428 1278 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 MMP2P08253 660 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 FOLR1P15328 257 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ANXA7P20073 488 aaKnown RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ELAVL4P26378 380 aaKnown RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 CRMP1Q14194 572 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 TESK1Q15569 626 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 SLX4IPQ5VYV7 408 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 PELI3Q8N2H9 469 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 EID2Q8N6I1 236 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 OR52N1Q8NH53 320 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ARRDC2Q8TBH0 407 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 SMIM14Q96QK8 99 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ADOQ96SZ5 270 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 RNF167Q9H6Y7 350 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 EVA1AQ9H8M9 152 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 H7C1Q1 480 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 TRIM77I1YAP6 450 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 OR7C1O76099 320 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-214ENST00000515035 S100A8P05109 93 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 ZNF28P17035 718 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 BDH1Q02338 343 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 TIGD3Q6B0B8 471 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 TMEM174Q8WUU8 243 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 DHRS9Q9BPW9 319 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 BET1O15155 118 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 SCO1O75880 301 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 DRD1P21728 446 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 DEFB103AP81534 67 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 SMAD2Q15796 467 aaKnown RBP12.33□□□□□ -0.44
TCOF1-214ENST00000515035 PLCXD3Q63HM9 321 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 PRSS45Q7RTY3 260 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 C1orf87Q8N0U7 546 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 MZB1Q8WU39 189 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 A0A0A6YYC8 382 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-214ENST00000515035 ANKRD30BLA7E2S9 258 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 I3L1I5 382 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-214ENST00000515035 SGK494L7N484 410 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 SOWAHCQ53LP3 525 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-214ENST00000515035 LPCAT3Q6P1A2 487 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 MBOAT2Q6ZWT7 520 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 HIST2H3AQ71DI3 136 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 HSD11B1LQ7Z5J1 315 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 FAM58AQ8N1B3 248 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 TTC9BQ8N6N2 239 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 OR9K2Q8NGE7 335 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 CASD1Q96PB1 797 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 TNFRSF13CQ96RJ3 184 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 METTL9Q9H1A3 318 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 RAB9BQ9NP90 201 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 HLA-HP01893 362 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 NTHL1P78549 312 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 POU3F1Q03052 451 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-214ENST00000515035 HNF4GQ14541 408 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 PLGLAQ15195 96 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 LIPIQ6XZB0 460 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 FJX1Q86VR8 437 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 VPS25Q9BRG1 176 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 ZMAT3Q9HA38 289 aaKnown RBP12.33□□□□□ -0.44
TCOF1-214ENST00000515035 MED16Q9Y2X0 877 aa12.33□□□□□ -0.44
TCOF1-214ENST00000515035 SDK1Q7Z5N4 2213 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 ADAM23O75077 832 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 DPP4P27487 766 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 FOXK1P85037 733 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 SRYQ05066 204 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 GGTA1PQ4G0N0 100 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 OGFOD3Q6PK18 319 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 ZNF784Q8NCA9 323 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-214ENST00000515035 KCNG3Q8TAE7 436 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 ISL2Q96A47 359 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 UBR2Q8IWV8 1755 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 ZNF593O00488 134 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-214ENST00000515035 SULT1C4O75897 302 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 RD3LP0DJH9 198 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms