RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ZNF79Q15937 498 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 TRIQKQ629K1 86 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 TMIGD1Q6UXZ0 262 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 Q6ZPB1 254 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 LINC00615Q96LM1 132 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 DMRTA2Q96SC8 542 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 TMED9Q9BVK6 235 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 CKAP5Q14008 2032 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 hCG_1809904A0A1W2PP81 198 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 A0A1W2PPE2 198 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 A0A1W2PR64 198 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 PRAMEF25A6NGN4 478 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 RNASET2O00584 256 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 PRODHO43272 600 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 PCDH7O60245 1069 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 TBX6O95947 436 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 PCCBP05166 539 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 HNRNPA1P09651 372 aaKnown RBP eCLIP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 CSF3P09919 207 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 EPHA8P29322 1005 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 PDE7AQ13946 482 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 KLHL22Q53GT1 634 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 PYDC2Q56P42 97 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 COX20Q5RI15 118 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 CPTPQ5TA50 214 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 FAHD1Q6P587 224 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 CFAP206Q8IYR0 622 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 OR2G2Q8NGZ5 317 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 NUS1Q96E22 293 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 RRNAD1Q96FB5 475 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 ATP6V0BQ99437 205 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 NRTNQ99748 197 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 KLHDC3Q9BQ90 382 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 ITPAQ9BY32 194 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 OR2AG1Q9H205 316 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 DMRT3Q9NQL9 472 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 GPR173Q9NS66 373 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 TMEM184CQ9NVA4 438 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 RBFOX1Q9NWB1 397 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 MS4A12Q9NXJ0 267 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 NDRG4Q9ULP0 352 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 LHX6Q9UPM6 363 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 PLEKHM1Q9Y4G2 1056 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 EYSQ5T1H1 3165 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 HEATR5BQ9P2D3 2071 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 USP34Q70CQ2 3546 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 SERPINE3A8MV23 424 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 YIF1AO95070 293 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 GBAP04062 536 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 RPLP0P05388 317 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 FPR1P21462 350 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF10P21506 573 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 GIFP27352 417 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 VIPR2P41587 438 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 HBA1P69905 142 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 MC1RQ01726 317 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 MVKQ03426 396 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 CCDC85BQ15834 202 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 OR8G2PQ6IF36 304 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 MED27Q6P2C8 311 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 LRRN1Q6UXK5 716 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 COMMD6Q7Z4G1 85 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 HAS2Q92819 552 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 GINS4Q9BRT9 223 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 ZDHHC5Q9C0B5 715 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 OR10A4Q9H209 315 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 RNF167Q9H6Y7 350 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 PARPBPQ9NWS1 579 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 TMEM184BQ9Y519 407 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 ORC6Q9Y5N6 252 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 PHOX2AO14813 284 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 BCAT2O15382 392 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 PLA2G10O15496 165 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 FGBP02675 491 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 FURINP09958 794 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 TSPAN19P0C672 248 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 TNFRSF1BP20333 461 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 NDUFS1P28331 727 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 ALDH3B1P43353 468 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 INPP1P49441 399 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 CEBPDP49716 269 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 CD81P60033 236 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 SLC35A2P78381 396 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 DPTQ07507 201 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF763Q0D2J5 394 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 TMEM240Q5SV17 173 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 CASP12Q6UXS9 341 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 PDZD3Q86UT5 571 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 CELF5Q8N6W0 485 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF740Q8NDX6 193 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 OR11H7Q8NGC8 314 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 OR4K1Q8NGD4 311 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 APH1BQ8WW43 257 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 ZCCHC14Q8WYQ9 949 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 MR1Q95460 341 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 CXorf40BQ96DE9 158 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 C14orf79Q96F83 325 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 SIGLEC11Q96RL6 698 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 BHLHE41Q9C0J9 482 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 CHST5Q9GZS9 411 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms