RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SPIN3Q5JUX0 258 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SLC18B1Q6NT16 456 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 OR52H1Q8NGJ2 320 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 TMEM234Q8WY98 164 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 RBP7Q96R05 134 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 OR7D2Q96RA2 312 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SLC19A3Q9BZV2 496 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 LDAHQ9H6V9 325 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 ACKR4Q9NPB9 350 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 MYEF2Q9P2K5 600 aaKnown RBP10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SLC6A14Q9UN76 642 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 IGLV3-10A0A075B6K4 115 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 ADAM10O14672 748 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 PAPLNO95428 1278 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SRMP19623 302 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 NDUFA6P56556 154 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 DEFB110Q30KQ9 67 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 FAM71E1Q6IPT2 247 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 TCTN3Q6NUS6 607 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SCGB1C1Q8TD33 95 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 CHAC2Q8WUX2 184 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 CLCC1Q96S66 551 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 ZFYVE21Q9BQ24 234 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 ZBP1Q9H171 429 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SIDT1Q9NXL6 827 aaKnown RBP10.42□□□□□ -0.74
TCOF1-211ENST00000513346 PLEKHB1Q9UF11 243 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-211ENST00000513346 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF98A6NK75 572 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 HBQ1P09105 142 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 FUT1P19526 365 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 NME2P22392 152 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 RAB13P51153 203 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 MMP15P51511 669 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 CTSCP53634 463 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 PFN3P60673 137 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 PLCXD2Q0VAA5 305 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 LPAL2Q16609 132 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 ST3GAL2Q16842 350 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 CCNJQ5T5M9 372 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 RSPO2Q6UXX9 243 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-211ENST00000513346 ACOT7LQ6ZUV0 252 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 OR2AK2Q8NG84 335 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 OR9A2Q8NGT5 310 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 RLN3Q8WXF3 142 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 TOE1Q96GM8 510 aaKnown RBP10.42□□□□□ -0.74
TCOF1-211ENST00000513346 PEX11GQ96HA9 241 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF223Q9UK11 482 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-211ENST00000513346 WIF1Q9Y5W5 379 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 KPTNQ9Y664 436 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SIGLEC6O43699 453 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 IFNA1P01562 189 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 IFNA5P01569 189 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 PRKAR1BP31321 381 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 SHC2P98077 582 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 CDK3Q00526 305 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 KIAA0141Q14154 515 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-211ENST00000513346 AFMIDQ63HM1 303 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 HSD17B13Q7Z5P4 300 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-211ENST00000513346 NAXDQ8IW45 347 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF561Q8N587 486 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 UBE2ZQ9H832 354 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-211ENST00000513346 DKKL1Q9UK85 242 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 FBXL4Q9UKA2 621 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 ELF5Q9UKW6 265 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-211ENST00000513346 CBLCQ9ULV8 474 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 ATG12O94817 140 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 CXCL10P02778 98 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 SLC6A1P30531 599 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 AFF3P51826 1226 aaKnown RBP10.41□□□□□ -0.74
TCOF1-211ENST00000513346 PDX1P52945 283 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 OR10A3P58181 314 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF79Q15937 498 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 HYAL4Q2M3T9 481 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF619Q8N2I2 560 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 OR51S1Q8NGJ8 323 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 FAM212BQ9NTI7 297 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-211ENST00000513346 FAM86C1Q9NVL1 165 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF443Q9Y2A4 671 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-211ENST00000513346 POLR2AP24928 1970 aaKnown RBP10.41□□□□□ -0.74
TCOF1-211ENST00000513346 CASP8AP2Q9UKL3 1982 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 A0A1W2PS29 197 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 TMEM200CA6NKL6 621 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 PPP1R2P9O14990 202 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 KNG1P01042 644 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 IMPA1P29218 277 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 PTGER1P34995 402 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 MRPS21P82921 87 aaKnown RBP10.41□□□□□ -0.74
TCOF1-211ENST00000513346 FOXK2Q01167 660 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 CRMP1Q14194 572 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 RBM39Q14498 530 aaKnown RBP10.41□□□□□ -0.74
TCOF1-211ENST00000513346 HLXQ14774 488 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-211ENST00000513346 OR1Q1Q15612 314 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 Q499Y3 187 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 C12orf73Q69YU5 71 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 TANGO2Q6ICL3 276 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 LCN10Q6JVE6 187 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 CORO6Q6QEF8 472 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 ESPNLQ6ZVH7 1005 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 FAM71CQ8NEG0 241 aa10.41□□□□□ -0.74
TCOF1-211ENST00000513346 OR13C2Q8NGS9 318 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms