RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 POLR3GO15318 223 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-216ENST00000512683 AKAP8O43823 692 aaKnown RBP10.91□□□□□ -0.66
VEGFA-216ENST00000512683 SLC43A1O75387 559 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 ZNF432O94892 652 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 AHSA1O95433 338 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 C8BP07358 591 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 CECR9P0C854 216 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 NCF2P19878 526 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-216ENST00000512683 NPR2P20594 1047 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 SELENOPP49908 381 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 BNIP2Q12982 314 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 PAGE3Q5JUK9 113 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 NIPAL3Q6P499 406 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 SERPINA11Q86U17 422 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 CADM2Q8N3J6 435 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 ARIH2OSQ8N7S6 290 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 OR6S1Q8NH40 331 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 C3orf49Q96BT1 292 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 C1orf159Q96HA4 380 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 OXGR1Q96P68 337 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 A4GALTQ9NPC4 353 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 CCDC167Q9P0B6 97 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 GMEB1Q9Y692 573 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.91□□□□□ -0.661e-8■■□□□ 14.5
VEGFA-216ENST00000512683 CR1P17927 2039 aa10.91□□□□□ -0.66
VEGFA-216ENST00000512683 TRBV5-3A0A0A0MS03 114 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 A0A0A6YYJ9 748 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 SLC35F4A4IF30 521 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 FTCDNL1E5RQL4 147 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 FRS3O43559 492 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 UPK3AO75631 287 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 LY6HO94772 140 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 GTF2E2P29084 291 aaKnown RBP10.9□□□□□ -0.66
VEGFA-216ENST00000512683 AQP5P55064 265 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 STX1BP61266 288 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 ROR2Q01974 943 aaKnown RBP10.9□□□□□ -0.66
VEGFA-216ENST00000512683 HGFACQ04756 655 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 FADDQ13158 208 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 CARTPTQ16568 116 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 REP15Q6BDI9 236 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 C6orf89Q6UWU4 347 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 SNX32Q86XE0 403 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 GOLGA6L1Q8N7Z2 621 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 LSMEM1Q8N8F7 131 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 LINC01356Q8N9X3 169 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 ADPRHL1Q8NDY3 354 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 PIK3C3Q8NEB9 887 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 SPDL1Q96EA4 605 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 LRR1Q96L50 414 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 BPESC1Q9GZL8 116 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 RAD21L1Q9H4I0 556 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 IKZF5Q9H5V7 419 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 VAPAQ9P0L0 249 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 USP22Q9UPT9 525 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 SPEF1Q9Y4P9 236 aa10.9□□□□□ -0.66
VEGFA-216ENST00000512683 NR5A2O00482 541 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 AIM2O14862 343 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 ARAFP10398 606 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 PNMTP11086 282 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 DAOP14920 347 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 ARF1P84077 181 aaKnown RBP10.89□□□□□ -0.67
VEGFA-216ENST00000512683 HOXC5Q00444 222 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 SCGB2A2Q13296 93 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 C1DQ13901 141 aaKnown RBP10.89□□□□□ -0.67
VEGFA-216ENST00000512683 CR1LQ2VPA4 569 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 ZNF311Q5JNZ3 666 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 FAM69AQ5T7M9 428 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 H1FNTQ75WM6 255 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-216ENST00000512683 COMTD1Q86VU5 262 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 GPR137CQ8N3F9 429 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 UBASH3BQ8TF42 649 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 ZFAND2BQ8WV99 257 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 DNAJA4Q8WW22 397 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-216ENST00000512683 MS4A5Q9H3V2 200 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 EVA1AQ9H8M9 152 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 CHODLQ9H9P2 273 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 TMEFF2Q9UIK5 374 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-216ENST00000512683 FBXL3Q9UKT7 428 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 CMAHPQ9Y471 501 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 CUBNO60494 3623 aa10.89□□□□□ -0.67
VEGFA-216ENST00000512683 TMEM129A0AVI4 362 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 ZNF99A8MXY4 864 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-216ENST00000512683 HMGB1P1B2RPK0 211 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-216ENST00000512683 hCG_2039718K7EN88 272 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 TCF21O43680 179 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 LILRA1O75019 489 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 ENTPD5O75356 428 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 ETS2P15036 469 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 H2AFXP16104 143 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-216ENST00000512683 GPX2P18283 190 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 CALCRP30988 508 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 THBS4P35443 961 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 ATP4BP51164 291 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 CLDN17P56750 224 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 MRPS11P82912 194 aaKnown RBP10.88□□□□□ -0.67
VEGFA-216ENST00000512683 EGR4Q05215 589 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 RIN1Q13671 783 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 AGKQ53H12 422 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 DLEU7Q6UYE1 221 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 DEF8Q6ZN54 512 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms