RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 OR9K2Q8NGE7 335 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 OR52E4Q8NGH9 312 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 DNAJA3Q96EY1 480 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 OR52E6Q96RD3 313 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 SORT1Q99523 831 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 C1QTNF6Q9BXI9 259 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 CENPHQ9H3R5 247 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 KCNK9Q9NPC2 374 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 SLC7A10Q9NS82 523 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 TMEM45AQ9NWC5 275 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 TMEM160Q9NX00 188 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 THUMPD1Q9NXG2 353 aaKnown RBP6.28□□□□□ -1.4
USP46-208ENST00000512656 P2RX2Q9UBL9 471 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 FBXO9Q9UK97 447 aaPredicted RBP6.28□□□□□ -1.4
USP46-208ENST00000512656 ANK2Q01484 3957 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 A0A096LPI6 279 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 CDHR4A6H8M9 788 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 LIPT2A6NK58 231 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 AQP7P3A6NL99 342 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 A8MVM7 634 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 VSTM5A8MXK1 200 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 ZNF587BE7ETH6 402 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 SLCO1B7G3V0H7 640 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 NDUFS8O00217 210 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 RFXANKO14593 260 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 HDAC3O15379 428 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 GPRIN2O60269 458 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 CRYAAP02489 173 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 IL6P05231 212 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 CHRM4P08173 479 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 IDO1P14902 403 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 CDH2P19022 906 aaPredicted RBP6.27□□□□□ -1.41
USP46-208ENST00000512656 NCF2P19878 526 aaPredicted RBP6.27□□□□□ -1.41
USP46-208ENST00000512656 BGNP21810 368 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 RPS4Y1P22090 263 aaKnown RBP6.27□□□□□ -1.41
USP46-208ENST00000512656 USF1P22415 310 aaPredicted RBP6.27□□□□□ -1.41
USP46-208ENST00000512656 GZMKP49863 264 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 PDLIM4P50479 330 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 CRISP3P54108 245 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 FOXG1P55316 489 aaPredicted RBP6.27□□□□□ -1.41
USP46-208ENST00000512656 SH3BGRP55822 239 aaPredicted RBP6.27□□□□□ -1.41
USP46-208ENST00000512656 NME5P56597 212 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 UFM1P61960 85 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 SNRPD2P62316 118 aaKnown RBP6.27□□□□□ -1.41
USP46-208ENST00000512656 SPOCK1Q08629 439 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 CEACAM7Q14002 265 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 OR7A5Q15622 319 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 TSPO2Q5TGU0 170 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 HHATQ5VTY9 493 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 B3GLCTQ6Y288 498 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 HMGN2P46Q86SG4 172 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 GPAT4Q86UL3 456 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 CADM2Q8N3J6 435 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 ZNF525Q8N782 197 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 ZNF540Q8NDQ6 660 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 OR52P1PQ8NH57 321 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 C10orf105Q8TEF2 133 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 AURKBQ96GD4 344 aaPredicted RBP6.27□□□□□ -1.41
USP46-208ENST00000512656 BOD1Q96IK1 185 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 ZNF317Q96PQ6 595 aaPredicted RBP6.27□□□□□ -1.41
USP46-208ENST00000512656 PAIP2Q9BPZ3 127 aaKnown RBP6.27□□□□□ -1.41
USP46-208ENST00000512656 C20orf27Q9GZN8 174 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 SHARPINQ9H0F6 387 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 RMND5AQ9H871 391 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 MYOZ1Q9NP98 299 aaPredicted RBP6.27□□□□□ -1.41
USP46-208ENST00000512656 AIG1Q9NVV5 245 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 RASD1Q9Y272 281 aa6.27□□□□□ -1.41
USP46-208ENST00000512656 CR1P17927 2039 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 HEATR1Q9H583 2144 aaKnown RBP6.26□□□□□ -1.41
USP46-208ENST00000512656 A0A096LNT2 108 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 A0A0G2JPF8 293 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 ZC3H12DA2A288 527 aaKnown RBP6.26□□□□□ -1.41
USP46-208ENST00000512656 HNRNPCL2B2RXH8 293 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 HNRNPCL3B7ZW38 293 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 B9A039 149 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 ATP6V1G2-DDX39BF2Z307 99 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 SDHDO14521 159 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 HNRNPCL1O60812 293 aaKnown RBP6.26□□□□□ -1.41
USP46-208ENST00000512656 SLC22A3O75751 556 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 AKR7A3O95154 331 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 AHSA1O95433 338 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 ANP32DO95626 131 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 ERCC1P07992 297 aaPredicted RBP6.26□□□□□ -1.41
USP46-208ENST00000512656 DBHP09172 617 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 ALDOCP09972 364 aaKnown RBP6.26□□□□□ -1.41
USP46-208ENST00000512656 TFPTP0C1Z6 253 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 HNRNPCL4P0DMR1 293 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 HNF1AP20823 631 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 GTF2E2P29084 291 aaKnown RBP6.26□□□□□ -1.41
USP46-208ENST00000512656 THBS2P35442 1172 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 SERPINF1P36955 418 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 CRATP43155 626 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 DSTNP60981 165 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 UBE2NP61088 152 aaKnown RBP6.26□□□□□ -1.41
USP46-208ENST00000512656 BST1Q10588 318 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 C3orf36Q3SXR2 165 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 HIKESHIQ53FT3 197 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 RNF220Q5VTB9 566 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 C1orf140Q5VVS0 124 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 ATG16L1Q676U5 607 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms