RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 KIR2DL5BA0A0G2JPC4 375 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 C12orf77C9JDV5 145 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 FOXE1O00358 373 aaPredicted RBP2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 CXCL11O14625 94 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 ERLIN2O94905 339 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 MOSP00540 346 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 SERPINA3P01011 423 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 MMP1P03956 469 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 ALDOBP05062 364 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 RCC1P18754 421 aaPredicted RBP2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 MDKP21741 143 aaPredicted RBP2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 RPS10P46783 165 aaKnown RBP2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 GYG1P46976 350 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 CDH4P55283 916 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 ERVK-25P63136 954 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 CEP55Q53EZ4 464 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 LRRC10Q5BKY1 277 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 CYB5R2Q6BCY4 276 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 LCN12Q6JVE5 192 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 KDM7AQ6ZMT4 941 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 LRRC74BQ6ZQY2 392 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 THOC6Q86W42 341 aaKnown RBP2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 KIR2DL5AQ8N109 375 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 UBE2J2Q8N2K1 259 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 TRPV1Q8NER1 839 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 OR1L6Q8NGR2 347 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 KIR2DL5BQ8NHK3 375 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 BLOC1S5Q8TDH9 187 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 ACOT11Q8WXI4 607 aaPredicted RBP2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 SHC3Q92529 594 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 PLEKHA8Q96JA3 519 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 OR2M2Q96R28 347 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 CNN2Q99439 309 aaKnown RBP2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 SDHCQ99643 169 aaPredicted RBP2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 TMEM246Q9BRR3 403 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 HDHD3Q9BSH5 251 aaPredicted RBP2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 SRMSQ9H3Y6 488 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 GLRX2Q9NS18 164 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 HEBP2Q9Y5Z4 205 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 SYNJ2BP-COX16A0A087WUM0 186 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 TRBV6-6A0A0A6YYG2 114 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 A0A0G2JN53 185 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 FAM240BA0A1B0GVZ2 78 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 OR52A4PA6NMU1 304 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 OR7A10O76100 309 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 KRT6AP02538 564 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 UBTFL1P0CB47 393 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 PNMA6AP0CW24 399 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 TOP1P11387 765 aaKnown RBP2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 ATP1B2P14415 290 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 ETS2P15036 469 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 MX1P20591 662 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 RORAP35398 523 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 HSD17B2P37059 387 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 TPMTP51580 245 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 KRTAP12-2P59991 146 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 DDX39BQ13838 428 aaKnown RBP2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 KIAA0087Q14695 138 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 GNMTQ14749 295 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 RFX4Q33E94 735 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 CTRB2Q6GPI1 263 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 CNIH2Q6PI25 160 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 IGFL2Q6UWQ7 119 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 C19orf35Q6ZS72 473 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 RUFY3Q7L099 469 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 ZNF429Q86V71 674 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 TPRX1Q8N7U7 411 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 OR51G1Q8NGK1 321 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 OR13C2Q8NGS9 318 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 OR6X1Q8NH79 312 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 ZNF606Q8WXB4 792 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 TMEM158Q8WZ71 300 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 SMARCD2Q92925 531 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 STMN2Q93045 179 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 FBXO32Q969P5 355 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 ZNF414Q96IQ9 312 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 HSFY1Q96LI6 401 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 MS4A4EQ96PG1 132 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 RIOK2Q9BVS4 552 aaKnown RBP2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 RANBP3Q9H6Z4 567 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 LY9Q9HBG7 655 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 EML4Q9HC35 981 aaKnown RBP2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 ZFP14Q9HCL3 533 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 ADAP2Q9NPF8 381 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 CCL28Q9NRJ3 127 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 CALYQ9NYX4 217 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 SLC25A37Q9NYZ2 338 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 CLCF1Q9UBD9 225 aa2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 ZNF223Q9UK11 482 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC11-207ENST00000511409 IGLV3-22A0A075B6J6 115 aa2.25□□□□□ -2.05
TRAPPC11-207ENST00000511409 FAM166BA8MTA8 275 aa2.25□□□□□ -2.05
TRAPPC11-207ENST00000511409 PSTPIP1O43586 416 aa2.25□□□□□ -2.05
TRAPPC11-207ENST00000511409 MGRN1O60291 552 aa2.25□□□□□ -2.05
TRAPPC11-207ENST00000511409 SLC25A27O95847 323 aa2.25□□□□□ -2.05
TRAPPC11-207ENST00000511409 PSG2P11465 335 aa2.25□□□□□ -2.05
TRAPPC11-207ENST00000511409 CRISP2P16562 243 aa2.25□□□□□ -2.05
TRAPPC11-207ENST00000511409 TCN1P20061 433 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC11-207ENST00000511409 ATP5C1P36542 298 aaKnown RBP2.25□□□□□ -2.05
TRAPPC11-207ENST00000511409 UCNP55089 124 aa2.25□□□□□ -2.05
TRAPPC11-207ENST00000511409 RPL23AP62750 156 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms