RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 RAD51DO75771 328 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 AKR7A3O95154 331 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 CNOT4O95628 575 aaKnown RBP7.56□□□□□ -1.2
PDPN-209ENST00000510906 PF4V1P10720 104 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 GGT1P19440 569 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 NCF2P19878 526 aaPredicted RBP7.56□□□□□ -1.2
PDPN-209ENST00000510906 PTH2RP49190 550 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 MAP2K6P52564 334 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 COPZ1P61923 177 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 CDK6Q00534 326 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 SRSF2Q01130 221 aaKnown RBP7.56□□□□□ -1.2
PDPN-209ENST00000510906 ROM1Q03395 351 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 BSPH1Q075Z2 132 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 SQLEQ14534 574 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 SLC17A1Q14916 467 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 PPA1Q15181 289 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 OTUD3Q5T2D3 398 aaPredicted RBP7.56□□□□□ -1.2
PDPN-209ENST00000510906 GCNT6Q5T4J0 391 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 PRAMEF8Q5VWM4 474 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 PRAMEF7Q5VXH5 474 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 FBXW9Q5XUX1 488 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 PAQR6Q6TCH4 344 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 CASP12Q6UXS9 341 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 YTHDF3Q7Z739 585 aaKnown RBP7.56□□□□□ -1.2
PDPN-209ENST00000510906 COMTD1Q86VU5 262 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 LYSMD2Q8IV50 215 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 ZNF611Q8N823 705 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 KBTBD8Q8NFY9 601 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 OR52E4Q8NGH9 312 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 BBS10Q8TAM1 723 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 MAGEB18Q96M61 343 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 SMR3AQ99954 134 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 NAA11Q9BSU3 229 aaPredicted RBP7.56□□□□□ -1.2
PDPN-209ENST00000510906 ESRP2Q9H6T0 727 aaKnown RBP7.56□□□□□ -1.2
PDPN-209ENST00000510906 CACYBPQ9HB71 228 aaKnown RBP7.56□□□□□ -1.2
PDPN-209ENST00000510906 NGBQ9NPG2 151 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 ARGLU1Q9NWB6 273 aaPredicted RBP7.56□□□□□ -1.2
PDPN-209ENST00000510906 NPAP1Q9NZP6 1156 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 MALT1Q9UDY8 824 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.56□□□□□ -1.2
PDPN-209ENST00000510906 IFT52Q9Y366 437 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 FLVCR1Q9Y5Y0 555 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 A0A1W2PP18 115 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 A0A1W2PR80 420 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 CIB4A0PJX0 185 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 AQP7P3A6NL99 342 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 CCT8L1PA6NM43 557 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 A8MVM7 634 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 DYNC1I1O14576 645 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 TPST1O60507 370 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 EDF1O60869 148 aaKnown RBP7.55□□□□□ -1.2
PDPN-209ENST00000510906 NPIPB7O75200 414 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 GPIP06744 558 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 SOD3P08294 240 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 ITGA5P08648 1049 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 CLEC2LP0C7M8 214 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 ETS2P15036 469 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 HTR2AP28223 471 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 P2RY4P51582 365 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 ZSWIM7Q19AV6 140 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 GLIPR1L2Q4G1C9 344 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 CT83Q5H943 113 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 TIMM23BQ5SRD1 257 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 TSPO2Q5TGU0 170 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 C9orf135Q5VTT2 229 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 C1orf140Q5VVS0 124 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 ADAM5Q6NVV9 412 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 DLEU7Q6UYE1 221 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 CIARTQ8N365 385 aaPredicted RBP7.55□□□□□ -1.2
PDPN-209ENST00000510906 ZIC4Q8N9L1 334 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 OR9K2Q8NGE7 335 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 OR52N5Q8NH56 324 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 TMEM171Q8WVE6 324 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 MUCL1Q96DR8 90 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 C18orf12Q96KH6 178 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 Q96MF0 132 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 ZNF385AQ96PM9 386 aaKnown RBP7.55□□□□□ -1.2
PDPN-209ENST00000510906 CPPED1Q9BRF8 314 aaPredicted RBP7.55□□□□□ -1.2
PDPN-209ENST00000510906 ZNF385DQ9H6B1 395 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 ARMC7Q9H6L4 198 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 SLC7A10Q9NS82 523 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 TMEM45AQ9NWC5 275 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 ASB6Q9NWX5 421 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 ADPRHL2Q9NX46 363 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 TAS2R16Q9NYV7 291 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 LAMP3Q9UQV4 416 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 SLC9A8Q9Y2E8 581 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 GMEB1Q9Y692 573 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 ARID1AO14497 2285 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 USF3Q68DE3 2245 aa7.55□□□□□ -1.2
PDPN-209ENST00000510906 TRIM64A6NGJ6 449 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 TRIM64BA6NI03 449 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 EVPLLA8MZ36 301 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 FTCDNL1E5RQL4 147 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 H7C1Q1 480 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 PDLIM1O00151 329 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 AHSA1O95433 338 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 C8BP07358 591 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 INHBBP09529 407 aa7.54□□□□□ -1.2
PDPN-209ENST00000510906 DANCRP0C864 163 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms