RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 HMGN4O00479 90 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 RFXANKO14593 260 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 PGM3O95394 542 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 ANP32DO95626 131 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 GPIP06744 558 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 SOD3P08294 240 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 DANCRP0C864 163 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 IGHV1-2P23083 117 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 PAX7P23759 505 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 APEX1P27695 318 aaKnown RBP6.53□□□□□ -1.36
CCSER1-208ENST00000509109 IDH2P48735 452 aaKnown RBP6.53□□□□□ -1.36
CCSER1-208ENST00000509109 MECP2P51608 486 aaKnown RBP6.53□□□□□ -1.36
CCSER1-208ENST00000509109 CRISP3P54108 245 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 OR2B6P58173 313 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 FAPQ12884 760 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 LARS2Q15031 903 aaKnown RBP6.53□□□□□ -1.36
CCSER1-208ENST00000509109 GSTA3Q16772 222 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 NRN1LQ496H8 165 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 SLC22A25Q6T423 547 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 PAQR6Q6TCH4 344 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 Q6ZSN1 163 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 ZNF621Q6ZSS3 439 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 MSANTD1Q6ZTZ1 278 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 DTX2Q86UW9 622 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 ZNF433Q8N7K0 673 aaPredicted RBP6.53□□□□□ -1.36
CCSER1-208ENST00000509109 ANKRD42Q8N9B4 389 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 ZNF75CPQ92670 426 aaPredicted RBP6.53□□□□□ -1.36
CCSER1-208ENST00000509109 FOXRED1Q96CU9 486 aaPredicted RBP6.53□□□□□ -1.36
CCSER1-208ENST00000509109 ARL5BQ96KC2 179 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 PARD6BQ9BYG5 372 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 C20orf27Q9GZN8 174 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 SLC38A1Q9H2H9 487 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 RAD21L1Q9H4I0 556 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 MTHFD2LQ9H903 347 aaPredicted RBP6.53□□□□□ -1.36
CCSER1-208ENST00000509109 FKRPQ9H9S5 495 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 MOV10Q9HCE1 1003 aaKnown RBP6.53□□□□□ -1.36
CCSER1-208ENST00000509109 NKIRAS1Q9NYS0 192 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 UPB1Q9UBR1 384 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 RAB21Q9UL25 225 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 AMDHD2Q9Y303 409 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 TMED7Q9Y3B3 224 aa6.53□□□□□ -1.36
CCSER1-208ENST00000509109 CHD3Q12873 2000 aaKnown RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 TMEM120BA0PK00 339 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 CDHR4A6H8M9 788 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 DPRXA6NFQ7 191 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 OR6C65A6NJZ3 312 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 C9JVG2 144 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 INAFM1C9JVW0 142 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 SDHDO14521 159 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 TLX2O43763 284 aaPredicted RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 ERLIN1O75477 346 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 SLC22A3O75751 556 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 DNAJC8O75937 253 aaPredicted RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 IGHV3-9P01782 118 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 CHRM4P08173 479 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 ALDOCP09972 364 aaKnown RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 RPS4Y1P22090 263 aaKnown RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 CXCR1P25024 350 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 GTF2E2P29084 291 aaKnown RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 EPHA3P29320 983 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 TACR3P29371 465 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 CDKN1AP38936 164 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 NUDT6P53370 316 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 SLC18A1P54219 525 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 NME5P56597 212 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 DSCR9P59020 149 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 DSTNP60981 165 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 UFM1P61960 85 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 PHC1P78364 1004 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 H3F3AP84243 136 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 TNK1Q13470 666 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 SYPL1Q16563 259 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 PDCD4Q53EL6 469 aaKnown RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 TNFAIP8L3Q5GJ75 292 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 C6orf10Q5SRN2 563 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 OTUD3Q5T2D3 398 aaPredicted RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 MRPL2Q5T653 305 aaKnown RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 RNF220Q5VTB9 566 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 NXNQ6DKJ4 435 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 WBP2NLQ6ICG8 309 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 ZNF544Q6NX49 715 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 CLEC2AQ6UVW9 174 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 OLIG3Q7RTU3 272 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 ADGRG3Q86Y34 549 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 FBXL14Q8N1E6 418 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 ANKFN1Q8N957 763 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 POMGNT2Q8NAT1 580 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 OR52N5Q8NH56 324 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 LILRB1Q8NHL6 650 aaPredicted RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 PNPT1Q8TCS8 783 aaKnown RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 CNOT9Q92600 299 aaKnown RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 ZNF524Q96C55 264 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 ITCHQ96J02 903 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 TRAF4Q9BUZ4 470 aaPredicted RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 SF3B5Q9BWJ5 86 aaKnown RBP6.52□□□□□ -1.37
CCSER1-208ENST00000509109 TAPBPLQ9BX59 468 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 OR11A1Q9GZK7 315 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 SLCO5A1Q9H2Y9 848 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 OBP2BQ9NPH6 170 aa6.52□□□□□ -1.37
CCSER1-208ENST00000509109 PNPOQ9NVS9 261 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms