RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ZNF432O94892 652 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 IGKV3-15P01624 115 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 IGLV1-44P01699 117 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 C8BP07358 591 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 NUDT7P0C024 238 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 CBR1P16152 277 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 PTNP21246 168 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 USF1P22415 310 aaPredicted RBP11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 GZMKP49863 264 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 IDH3AP50213 366 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 PPOXP50336 477 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 RGS8P57771 180 aaPredicted RBP11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 IL1RL1Q01638 556 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 NAAAQ02083 359 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 RBBP4Q09028 425 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 SCARB2Q14108 478 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 C6orf52Q5T4I8 152 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 SLC46A3Q7Z3Q1 461 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 UEVLDQ8IX04 471 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 ZNF525Q8N782 197 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 ZBTB9Q96C00 473 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 FBXO17Q96EF6 278 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 KTI12Q96EK9 354 aaPredicted RBP11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 SIKE1Q9BRV8 207 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 RAB1BQ9H0U4 201 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 ZNF442Q9H7R0 627 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 FBXL3Q9UKT7 428 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 TRIM33Q9UPN9 1127 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 NOX1Q9Y5S8 564 aa11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 YLPM1P49750 1951 aaKnown RBP11.85□□□□□ -0.51
CCHCR1-227ENST00000508852 ATRQ13535 2644 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 ARFGEF3Q5TH69 2177 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 ALPK2Q86TB3 2170 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 A0A087WUJ7 227 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 A0A096LNT2 108 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 ZNF99A8MXY4 864 aaPredicted RBP11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 M0R082 166 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 FMO6PO60774 539 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 UPK3AO75631 287 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 MT-ATP6P00846 226 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 NQO1P15559 274 aaKnown RBP11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 AQP5P55064 265 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 LSM11P83369 360 aaKnown RBP eCLIP11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 AGKQ53H12 422 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 UGT2A3Q6UWM9 527 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 ARMC8Q8IUR7 673 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 FUNDC1Q8IVP5 155 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 C11orf65Q8NCR3 313 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 ZNF417Q8TAU3 575 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 TSPEARQ8WU66 669 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 NANOS1Q8WY41 292 aaKnown RBP11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 TAAR8Q969N4 342 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 ATP6V1G3Q96LB4 118 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 ZNF587Q96SQ5 575 aaPredicted RBP11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 KCNK17Q96T54 332 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 TMEM43Q9BTV4 400 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 GPR35Q9HC97 309 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 SLC25A37Q9NYZ2 338 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 KLHL14Q9P2G3 628 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 LEF1Q9UJU2 399 aaPredicted RBP11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 ADAM21Q9UKJ8 722 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 SPEF1Q9Y4P9 236 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 COL6A5A8TX70 2615 aa11.84□□□□□ -0.51
CCHCR1-227ENST00000508852 TRBV5-3A0A0A0MS03 114 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 ZNF726A6NNF4 738 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 OR4A8P0C604 315 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 CECR9P0C854 216 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 FAM157CP0CG43 387 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 GRPRP30550 384 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 THBS2P35442 1172 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 ARF1P84077 181 aaKnown RBP11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 HOXC5Q00444 222 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 MST1LQ2TV78 715 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 ZNF613Q6PF04 617 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 PXKQ7Z7A4 578 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 RNF217Q8TC41 542 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 NEU4Q8WWR8 484 aaPredicted RBP11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 RASSF5Q8WWW0 418 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 TMEM158Q8WZ71 300 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 SLC41A3Q96GZ6 507 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 MDFIQ99750 246 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 BEX2Q9BXY8 128 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 PLK3Q9H4B4 646 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 CRLF2Q9HC73 371 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 MRPL39Q9NYK5 338 aaKnown RBP11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 VAPAQ9P0L0 249 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 B3GAT1Q9P2W7 334 aa11.83□□□□□ -0.52
CCHCR1-227ENST00000508852 MXRA5Q9NR99 2828 aa11.82□□□□□ -0.52
CCHCR1-227ENST00000508852 A0A096LPE4 126 aa11.82□□□□□ -0.52
CCHCR1-227ENST00000508852 A0A0B4J2E0 115 aa11.82□□□□□ -0.52
CCHCR1-227ENST00000508852 A0A1B0GX12 115 aa11.82□□□□□ -0.52
CCHCR1-227ENST00000508852 A0A1W2PPZ6 126 aa11.82□□□□□ -0.52
CCHCR1-227ENST00000508852 HMGB1P1B2RPK0 211 aaPredicted RBP11.82□□□□□ -0.52
CCHCR1-227ENST00000508852 ANGPT2O15123 496 aa11.82□□□□□ -0.52
CCHCR1-227ENST00000508852 OR6A2O95222 327 aa11.82□□□□□ -0.52
CCHCR1-227ENST00000508852 NPR2P20594 1047 aa11.82□□□□□ -0.52
CCHCR1-227ENST00000508852 HNF1AP20823 631 aa11.82□□□□□ -0.52
CCHCR1-227ENST00000508852 HTR2AP28223 471 aa11.82□□□□□ -0.52
CCHCR1-227ENST00000508852 EVX1P49640 407 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms