RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 CCKARP32238 428 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 RASSF2P50749 326 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 HMGA2P52926 109 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 NR1H2P55055 460 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 MXRA7P84157 204 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 PRKCDQ05655 676 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 PUDPQ08623 228 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 TRAP1Q12931 704 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 PMS2P3Q13401 168 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 TAF11Q15544 211 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 C3orf36Q3SXR2 165 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 TMPRSS11FQ6ZWK6 438 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 HIST3H2AQ7L7L0 130 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 AAED1Q7RTV5 226 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 TSEN54Q7Z6J9 526 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 VTCN1Q7Z7D3 282 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 CXorf67Q86X51 503 aaPredicted RBP9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 CCDC36Q8IYA8 594 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 FAM169BQ8N8A8 192 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 ZNF417Q8TAU3 575 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 LINC01560Q8TB33 94 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 NINJ1Q92982 152 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 HIST1H2ACQ93077 130 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 ADAD1Q96M93 576 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 NSMCE2Q96MF7 247 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 MOGAT1Q96PD6 335 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 ZNF587Q96SQ5 575 aaPredicted RBP9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 FNDC11Q9BVV2 318 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 ACTR6Q9GZN1 396 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 OCEL1Q9H607 264 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 NMNAT1Q9HAN9 279 aaPredicted RBP9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 SLC7A10Q9NS82 523 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 TAS2R5Q9NYW4 299 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 NDUFAF4Q9P032 175 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 STX18Q9P2W9 335 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 EGFL7Q9UHF1 273 aa9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 FAM32AQ9Y421 112 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-213ENST00000508848 ZNF682O95780 498 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 THBDP07204 575 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 IL32P24001 234 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 SLC9A3P48764 834 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 C1DQ13901 141 aaKnown RBP9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 GK3PQ14409 553 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 GABRA6Q16445 453 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 EXOC3L2Q2M3D2 409 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 DNAL1Q4LDG9 190 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 BEX5Q5H9J7 111 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 LCN8Q6JVE9 175 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 ADAM5Q6NVV9 412 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 PGM2L1Q6PCE3 622 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 DEF8Q6ZN54 512 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 MBOAT2Q6ZWT7 520 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 BHLHA15Q7RTS1 189 aaPredicted RBP9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 SLC46A3Q7Z3Q1 461 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 HDDC2Q7Z4H3 204 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 GPAT4Q86UL3 456 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 NKAIN4Q8IVV8 208 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 UEVLDQ8IX04 471 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 CDK20Q8IZL9 346 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 OR6X1Q8NH79 312 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 RNF217Q8TC41 542 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 ZNF775Q96BV0 537 aaPredicted RBP9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 MUCL1Q96DR8 90 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 ASB9Q96DX5 294 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 RADILQ96JH8 1075 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 HSH2DQ96JZ2 352 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 LURAP1Q96LR2 239 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 ZNF385AQ96PM9 386 aaKnown RBP9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 ZNF347Q96SE7 839 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 SEPHS2Q99611 448 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 TMEM204Q9BSN7 226 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 FUZQ9BT04 418 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 MMADHCQ9H3L0 296 aaPredicted RBP9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 MAGIXQ9H6Y5 334 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 MAN2C1Q9NTJ4 1040 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 GMPR2Q9P2T1 348 aaKnown RBP9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 UPB1Q9UBR1 384 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 PRSS50Q9UI38 385 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 DSCAMO60469 2012 aa9.34□□□□□ -0.91
POLR2J3-213ENST00000508848 RAI1Q7Z5J4 1906 aaPredicted RBP9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 A0A087WUU8 490 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 DEFB108AA8MXU0 73 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 ARPC2O15144 300 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 ENTPD5O75356 428 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 SLC43A1O75387 559 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 KRT36O76013 467 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 OR7A10O76100 309 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 OR6A2O95222 327 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 CH25HO95992 272 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 ITGA5P08648 1049 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 NQO1P15559 274 aaKnown RBP9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 NCK1P16333 377 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 FUT1P19526 365 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 TNFRSF1BP20333 461 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 RPS4XP62701 263 aaKnown RBP9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 FAPQ12884 760 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 BNIP1Q12981 228 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 NRN1LQ496H8 165 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 TSPO2Q5TGU0 170 aa9.33□□□□□ -0.92
POLR2J3-213ENST00000508848 CASP12Q6UXS9 341 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms